Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq101 167 4e-36
seq57 143 5e-29
seq190 131 3e-25
seq277 102 2e-16
>seq101
Length=1115905
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||| ||| || |||||||| || |||||||| || |||
Sbjct 940079 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 940020
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || ||||| | || ||||| || |||
Sbjct 940019 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 939960
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 939959 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 939900
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || || ||||||||||||||||| ||||||||
Sbjct 939899 TCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853
>seq57
Length=3318891
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || || || || |||||||| || ||| |
Sbjct 1505194 CCACCACGCAGACGAAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTG 1505135
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||||| |||||||| || |||| ||||| || || |||
Sbjct 1505134 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGA 1505075
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||| || || ||||| | ||| ||| |||||||| || | ||||| ||
Sbjct 1505074 ATACCTTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACC 1505015
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct 1505014 TCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968
Score = 131 bits (144), Expect = 3e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | || | || || |||||||| || || ||||| || |||| |
Sbjct 1504966 CCACCACGAAGGCGGAGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 1504907
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | || || || || ||
Sbjct 1504906 AGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGG 1504847
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 1504846 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 1504787
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | |||||| || || || || |||||||||||||
Sbjct 1504786 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGA 1504750
Score = 113 bits (124), Expect = 8e-20
Identities = 426/665 (64%), Gaps = 5/665 (1%)
Strand=Plus/Plus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| ||||| |||| |||||||||||||||| | || || || |||||| || | | |
Sbjct 2233497 TAACGCCATTGGAGGTACTGGTTGGGGGTCTTCTCAAGATGCATCTCAACGTGCTCCAGA 2233556
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| ||||| | ||| | || || | |||||| |||||| || || |
Sbjct 2233557 GCGTGCTGCTTGATGTAGCCGATACGTAAGTTGGGGTGCTTCTCGACCTTTCCGGTGGAA 2233616
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| | ||||||||| || | ||||||||| || | ||| || || || |||||||||
Sbjct 2233617 GGGATGGTCTCGCCGGTAAGCAGCTTGATGAGAGTCGACTTTCCAGCTCCGTTGGGGCCA 2233676
Query 225158 ATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGT--TGCTGAAGAT--CTC 225213
|| | | ||| ||||| |||| | | ||| | || | ||| | ||| ||
Sbjct 2233677 ATGATGGCAACACGGGACGACAGGGTCAGCTGGCAAGAAACCTCATGCA-AGGATGGCTT 2233735
Query 225214 AGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTGGA 225273
| | | | |||| | ||| ||| | || |||||||||||| | ||||
Sbjct 2233736 TGTGGCCTTGGGGTAGGTGTAGGAGACGTTGCTCATGCGGATGATGGCACGGGTCATGGA 2233795
Query 225274 AGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAG 225333
| | ||| || || ||||| ||||||| ||| | | || |||
Sbjct 2233796 CTTGACACCTGTCAAGATACCGGGAGGAGGGAACTTGAACTGAACGTTGGAGGCCGACAG 2233855
Query 225334 GTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTG 225393
| ||| ||| |||||||| || | | || || |||| |||||| || ||
Sbjct 2233856 GGTGTAATAACTCTTGGCCTCGGGGCGGATCTCGACAAAGGCAGCCAGGTTACCCTTGTA 2233915
Query 225394 CTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAA 225453
| ||||| ||| |||||| || || | | | || |||||||||
Sbjct 2233916 GCAGGCCAGCTTCTTGTTGGGCTCGTAGTGGTAGATATCAGTGGTAACGTTGTCAAGGAA 2233975
Query 225454 GCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGAT 225513
||||||||||||||||| || | || | | | | || |||||||| |
Sbjct 2233976 ACCAGAGTCGTGGGACACGATCAGAGAAGTGATATCGGGATGGGTCTTGAGGTAGTTCTC 2234035
Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573
||||||||| | |||| || || | ||||| |||||||||||||| || |||| ||
Sbjct 2234036 GAGCCATGCAATGTTGGCAACATCAAGATGGTTGGTAGGTTCGTCCAGGAGAAGGACATC 2234095
Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633
|||| ||| ||||| || | |||| ||||||||| ||||| || || ||||| ||
Sbjct 2234096 AGCACGCTGGAGCATGGCCCGGGCCAGAGCCAGCTTCATCTTCCAACCACCAGACAGAGA 2234155
Query 225634 GCCGA 225638
|||||
Sbjct 2234156 GCCGA 2234160
>seq190
Length=2306874
Score = 131 bits (144), Expect = 3e-25
Identities = 445/674 (66%), Gaps = 47/674 (7%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | ||| ||| ||||||||||||| || || || ||| ||
Sbjct 404044 CGCCACTGGATGTACTCGGAGGGAGTCTTGTCCAGGTGGTTATCGATGTGAGCGAAGGCG 404103
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099
||||| | ||| || || || ||||| |||| | | | | || || ||
Sbjct 404104 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCGCGGTGGGG 404163
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | ||| || |||||||| ||||| || |||| |||||| ||||| ||||| || ||
Sbjct 404164 ATGAG-CTCACCAGTGAGGACGTTGATCAGAGTAGACTTGCCGGCACCGTTGGGACCGAT 404222
Query 225160 CACGCCAATCCGGGATGACATTGCAAC-CTG---CGAGTTCACGTTG--CTGAAGATCTC 225213
||| |||| || || | || | | ||| ||| | || || |||| | |
Sbjct 404223 AACGGCAATACGAGA-GCCAAGAGAGCACTGGAAGGAGATGTCGGTGATCTGAGGCTTGG 404281
Query 225214 AGG-GCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGT 225266
||| |||| |||| |||| || | ||||||| |||||| |
Sbjct 404282 AGGTACCAG---GGTACTGGAAGGACATCTTGGTGGCACGCAG------GATGGCCTTGG 404332
Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326
|||||| | | |||||| ||||| |||||||||||||| ||| | || | | |
Sbjct 404333 CCTTGGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAAGGAGAACTCGATCTCGGAGG 404392
Query 225327 CCTTCAGGTCGTAGTAAGAT---GCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGT 225383
| || |||||||||||| |||| ||| | | || || || |||| |||||
Sbjct 404393 CACCGAGCTCGTAGTAAGATCGGGCAG--AGGGGACACGCTG-GACAAAGGCAGCCAGGT 404449
Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACT 225442
| || || | ||||||||| | |||||| || || || ||| | ||| ||
Sbjct 404450 TACCCCTGTAGCGCTTGAGCTTGAAG---CGCTCGTAGTGGACGATGTGCTG-GCAGACG 404505
Query 225443 GCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTT 225501
||| |||||||||||||||||||| || |||||||| | || | | | | |
Sbjct 404506 TTGTCGAGGAAGCCAGAGTCGTGGGAGACGATGATGGAAGTGCAAG---GGGA-GTTGAT 404561
Query 225502 GAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAG 225561
||||| | |||||| ||||| | || |||| ||||| ||||| ||||| ||
Sbjct 404562 GAGGTACTCCTCGAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCGAG 404621
Query 225562 AAGCAGGATGTC---AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCA 225618
|||||| || || ||| ||| | || ||| || |||| ||||||||| |||||
Sbjct 404622 AAGCAGAATATCGGGAGCCTCA---AAGACGGCACGGCACAGAGCCAGCTTCATCTTCCA 404678
Query 225619 GCCCCCGGACAGGG 225632
|| || || ||||
Sbjct 404679 ACCACCAGAAAGGG 404692
>seq277
Length=3871947
Score = 102 bits (112), Expect = 2e-16
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 68361 TCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420
|||||||| |||||||| | ||||||| ||||||||||| | ||||| || || | |
Sbjct 2871175 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGG 2871234
Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||| ||||| |||||||||||||| || || |||||
Sbjct 2871235 GTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 2871275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619093679640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |