Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq101 167 4e-36 seq57 143 5e-29 seq190 131 3e-25 seq277 102 2e-16 >seq101 Length=1115905 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| || |||||||| || ||| Sbjct 940079 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 940020 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||| | || ||||| || ||| Sbjct 940019 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 939960 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 939959 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 939900 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || ||||||||||||||||| |||||||| Sbjct 939899 TCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853 >seq57 Length=3318891 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || || || || |||||||| || ||| | Sbjct 1505194 CCACCACGCAGACGAAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTG 1505135 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || |||| ||||| || || ||| Sbjct 1505134 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGA 1505075 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || || ||||| | ||| ||| |||||||| || | ||||| || Sbjct 1505074 ATACCTTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACC 1505015 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| ||||| ||||||||||| || ||||| Sbjct 1505014 TCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 131 bits (144), Expect = 3e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | || || |||||||| || || ||||| || |||| | Sbjct 1504966 CCACCACGAAGGCGGAGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 1504907 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || || || || || Sbjct 1504906 AGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGG 1504847 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||| ||||| | || || || Sbjct 1504846 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 1504787 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||| || || || || ||||||||||||| Sbjct 1504786 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGA 1504750 Score = 113 bits (124), Expect = 8e-20 Identities = 426/665 (64%), Gaps = 5/665 (1%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| |||| |||||||||||||||| | || || || |||||| || | | | Sbjct 2233497 TAACGCCATTGGAGGTACTGGTTGGGGGTCTTCTCAAGATGCATCTCAACGTGCTCCAGA 2233556 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | || || | |||||| |||||| || || | Sbjct 2233557 GCGTGCTGCTTGATGTAGCCGATACGTAAGTTGGGGTGCTTCTCGACCTTTCCGGTGGAA 2233616 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || | ||||||||| || | ||||||||| || | ||| || || || ||||||||| Sbjct 2233617 GGGATGGTCTCGCCGGTAAGCAGCTTGATGAGAGTCGACTTTCCAGCTCCGTTGGGGCCA 2233676 Query 225158 ATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGT--TGCTGAAGAT--CTC 225213 || | | ||| ||||| |||| | | ||| | || | ||| | ||| || Sbjct 2233677 ATGATGGCAACACGGGACGACAGGGTCAGCTGGCAAGAAACCTCATGCA-AGGATGGCTT 2233735 Query 225214 AGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTGGA 225273 | | | | |||| | ||| ||| | || |||||||||||| | |||| Sbjct 2233736 TGTGGCCTTGGGGTAGGTGTAGGAGACGTTGCTCATGCGGATGATGGCACGGGTCATGGA 2233795 Query 225274 AGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAG 225333 | | ||| || || ||||| ||||||| ||| | | || ||| Sbjct 2233796 CTTGACACCTGTCAAGATACCGGGAGGAGGGAACTTGAACTGAACGTTGGAGGCCGACAG 2233855 Query 225334 GTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTG 225393 | ||| ||| |||||||| || | | || || |||| |||||| || || Sbjct 2233856 GGTGTAATAACTCTTGGCCTCGGGGCGGATCTCGACAAAGGCAGCCAGGTTACCCTTGTA 2233915 Query 225394 CTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAA 225453 | ||||| ||| |||||| || || | | | || ||||||||| Sbjct 2233916 GCAGGCCAGCTTCTTGTTGGGCTCGTAGTGGTAGATATCAGTGGTAACGTTGTCAAGGAA 2233975 Query 225454 GCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGAT 225513 ||||||||||||||||| || | || | | | | || |||||||| | Sbjct 2233976 ACCAGAGTCGTGGGACACGATCAGAGAAGTGATATCGGGATGGGTCTTGAGGTAGTTCTC 2234035 Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573 ||||||||| | |||| || || | ||||| |||||||||||||| || |||| || Sbjct 2234036 GAGCCATGCAATGTTGGCAACATCAAGATGGTTGGTAGGTTCGTCCAGGAGAAGGACATC 2234095 Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633 |||| ||| ||||| || | |||| ||||||||| ||||| || || ||||| || Sbjct 2234096 AGCACGCTGGAGCATGGCCCGGGCCAGAGCCAGCTTCATCTTCCAACCACCAGACAGAGA 2234155 Query 225634 GCCGA 225638 ||||| Sbjct 2234156 GCCGA 2234160 >seq190 Length=2306874 Score = 131 bits (144), Expect = 3e-25 Identities = 445/674 (66%), Gaps = 47/674 (7%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | ||| ||| ||||||||||||| || || || ||| || Sbjct 404044 CGCCACTGGATGTACTCGGAGGGAGTCTTGTCCAGGTGGTTATCGATGTGAGCGAAGGCG 404103 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || || ||||| |||| | | | | || || || Sbjct 404104 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCGCGGTGGGG 404163 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || |||||||| ||||| || |||| |||||| ||||| ||||| || || Sbjct 404164 ATGAG-CTCACCAGTGAGGACGTTGATCAGAGTAGACTTGCCGGCACCGTTGGGACCGAT 404222 Query 225160 CACGCCAATCCGGGATGACATTGCAAC-CTG---CGAGTTCACGTTG--CTGAAGATCTC 225213 ||| |||| || || | || | | ||| ||| | || || |||| | | Sbjct 404223 AACGGCAATACGAGA-GCCAAGAGAGCACTGGAAGGAGATGTCGGTGATCTGAGGCTTGG 404281 Query 225214 AGG-GCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGT 225266 ||| |||| |||| |||| || | ||||||| |||||| | Sbjct 404282 AGGTACCAG---GGTACTGGAAGGACATCTTGGTGGCACGCAG------GATGGCCTTGG 404332 Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326 |||||| | | |||||| ||||| |||||||||||||| ||| | || | | | Sbjct 404333 CCTTGGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAAGGAGAACTCGATCTCGGAGG 404392 Query 225327 CCTTCAGGTCGTAGTAAGAT---GCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGT 225383 | || |||||||||||| |||| ||| | | || || || |||| ||||| Sbjct 404393 CACCGAGCTCGTAGTAAGATCGGGCAG--AGGGGACACGCTG-GACAAAGGCAGCCAGGT 404449 Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACT 225442 | || || | ||||||||| | |||||| || || || ||| | ||| || Sbjct 404450 TACCCCTGTAGCGCTTGAGCTTGAAG---CGCTCGTAGTGGACGATGTGCTG-GCAGACG 404505 Query 225443 GCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTT 225501 ||| |||||||||||||||||||| || |||||||| | || | | | | | Sbjct 404506 TTGTCGAGGAAGCCAGAGTCGTGGGAGACGATGATGGAAGTGCAAG---GGGA-GTTGAT 404561 Query 225502 GAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAG 225561 ||||| | |||||| ||||| | || |||| ||||| ||||| ||||| || Sbjct 404562 GAGGTACTCCTCGAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCGAG 404621 Query 225562 AAGCAGGATGTC---AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCA 225618 |||||| || || ||| ||| | || ||| || |||| ||||||||| ||||| Sbjct 404622 AAGCAGAATATCGGGAGCCTCA---AAGACGGCACGGCACAGAGCCAGCTTCATCTTCCA 404678 Query 225619 GCCCCCGGACAGGG 225632 || || || |||| Sbjct 404679 ACCACCAGAAAGGG 404692 >seq277 Length=3871947 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 68361 TCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420 |||||||| |||||||| | ||||||| ||||||||||| | ||||| || || | | Sbjct 2871175 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGG 2871234 Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| ||||| |||||||||||||| || || ||||| Sbjct 2871235 GTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 2871275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619093679640