Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq57 149 1e-30 seq124 105 2e-17 seq101 100 7e-16 seq179 93.3 1e-13 >seq57 Length=3318891 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || ||| || ||||| || |||||| | Sbjct 1505194 CCACCACGCAGACGAAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTG 1505135 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||| || || |||||||| || ||||||||| | || Sbjct 1505134 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGA 1505075 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||||||||| |||| |||||||| || || | |||| |||||| || Sbjct 1505074 ATACCTTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACC 1505015 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || ||||||||||| || ||||| Sbjct 1505014 TCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 134 bits (148), Expect = 3e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||||| ||| || || || || || ||||||||| Sbjct 1504966 CCACCACGAAGGCGGAGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 1504907 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| || |||||||| ||||| ||| | ||| Sbjct 1504906 AGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGG 1504847 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || || | ||| || || || Sbjct 1504846 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 1504787 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| ||||| ||||| |||||||| |||||||||| Sbjct 1504786 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGA 1504750 Score = 111 bits (122), Expect = 4e-19 Identities = 165/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || ||||| | || || || |||| || || || || || || ||||| Sbjct 1505425 TGACCGCCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCA 1505366 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | | ||||| |||||||| | || || || |||||||| || ||||| || || Sbjct 1505365 GACAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGG---TCG 1505309 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || ||||| || || | ||||| || || || | |||||| || Sbjct 1505308 GGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATGGTATCGCTGGAC 1505249 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| ||||| ||||||||||| || |||||||| Sbjct 1505248 TCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196 >seq124 Length=1203342 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| | ||| ||| |||| ||| | | |||| ||||| || || |||||||| Sbjct 1088170 GAGTTCCTGACTGAGGCTCTCCCCTGTGCCCTCCTCGGCATGAACGCAGACCTCATGAAG 1088111 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238 || || ||||| ||||| || || ||| || | || ||||| | || || || ||| Sbjct 1088110 CAGTACATCGAGTTCGTCGCCGACCGTCTCCTGGTCGCCCTCGGCAACGACAAGGTCTAC 1088051 Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298 || | | || ||||||| ||| ||||| || || || | || |||||||||||| Sbjct 1088050 AAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACGAACTTC 1087991 Query 269299 TTCGAAAAGCGTGTCAGCGACTATCA 269324 || || ||||||||| | ||||| || Sbjct 1087990 TTTGAGAAGCGTGTCGGTGACTACCA 1087965 >seq101 Length=1115905 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| || || ||||| || |||||| Sbjct 940079 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 940020 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || || ||| Sbjct 940019 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGG---TCCGGG 939963 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || | || ||||| || || | ||| || || Sbjct 939962 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCC 939903 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 939902 ACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853 >seq179 Length=1234945 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| || || || || || | || || || ||||||||| Sbjct 140962 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 140903 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| ||| ||||| || || || |||||||| || | || || || || Sbjct 140902 AGTCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 140843 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || ||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 140842 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 140784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650062189586