Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq124 109 1e-18 seq190 84.2 5e-11 >seq124 Length=1203342 Score = 109 bits (120), Expect = 1e-18 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||| | || |||||| ||||||||||| ||||| |||||||| | | || Sbjct 1088134 GGCATGAACGCAGACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTGGTC 1088075 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || | || || || ||||| ||| |||||||| | ||| |||||| ||| Sbjct 1088074 GCCCTCGGCAACGACAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATC 1088015 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || ||| || || || |||||||| || ||||||||| |||| || || Sbjct 1088014 TCCCTTGGTGGCAAGACGAACTTCTTTGAGAAGCGTGTCGGTGACTACCA 1087965 >seq190 Length=2306874 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240 |||||| || || | ||| |||| || || ||||| ||||| || || || | || Sbjct 404880 GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCACGCATGAGAGTGGACTTTCCGGAACC 404939 Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300 ||| || || || ||||||||||| | |||||||| || || | || | ||| || Sbjct 404940 GTTGGGACCGCAAAGACCGTAGCGCTGACCACGCTTGAGGCGGAGGTGAGTCTGGTTGAG 404999 Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||||| || |||| || || ||||| || ||| | || ||||||||||| Sbjct 405000 AAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 405053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875944503450