Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq57 113 4e-20 seq101 107 2e-18 seq124 95.1 1e-14 >seq57 Length=3318891 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| | || | |||| ||||| || |||||||||||||| Sbjct 1505194 CCACCACGCAGACGAAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTG 1505135 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||||||| || |||| |||| || |||||||| || ||||| Sbjct 1505134 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGA 1505075 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| || || | | || | ||| |||| ||| |||||| Sbjct 1505074 ATACCTTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACC 1505015 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || || || || || || ||||| Sbjct 1505014 TCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | || | | | |||||||| |||||||||||||| | Sbjct 1505422 CCGCCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAC 1505363 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || ||||| | |||| || ||||| ||||| || || Sbjct 1505362 AAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGA 1505303 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || |||| || | ||| ||| | ||||| | Sbjct 1505302 ATACCCTCCTTGTC-CTGAATCTTGGACTTCACATTG-TCAATGGTATCGCTGGACTCGA 1505245 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || ||||| || ||||| |||||||| Sbjct 1505244 CCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196 >seq101 Length=1115905 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || || || | | Sbjct 940046 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 939987 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 939986 AAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 939927 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| | || | ||| || || || || || || Sbjct 939926 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTG 939867 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 939866 ACGAAGATCTGCAT 939853 >seq124 Length=1203342 Score = 95.1 bits (104), Expect = 1e-14 Identities = 295/450 (66%), Gaps = 19/450 (4%) Strand=Plus/Minus Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCA 52455 |||| | || |||||||| ||||||||| | || || || ||||||| ||| Sbjct 1088406 AGCGTCTCGTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCA 1088347 Query 52456 TCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATAT 52515 |||| | | || | | || | ||||| || ||||| ||| ||||||| | || | Sbjct 1088346 TCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCT 1088287 Query 52516 CGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCT---ACT---ACAAGACGCGC- 52568 | || || || || || ||||| |||||||| |||||| ||| || | | || Sbjct 1088286 CTCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTCCTTCACTCTCACCTCAAGGGCC 1088227 Query 52569 GTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATC 52628 ||| | || | | || || ||| | ||| ||| || || || | || Sbjct 1088226 GTGCTAGCAA----GCA---GGTCA---TCCAGGACATCATCACTGATGCCGTCACCATT 1088177 Query 52629 GAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC 52688 || ||||||| | || | || || || | || || ||||||||||| | | Sbjct 1088176 GAGCAGGAGTTCCTGACTGAGGCTCTCCCCTGTGCCCTCCTCGGCATGAACGCAGACCTC 1088117 Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AA 52747 ||| ||||||||||||| || || || ||||| |||| ||| |||| | | || Sbjct 1088116 ATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTGGTCGCCCTC-GGCAACGACAA 1088058 Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807 | || ||| || ||| || || || || ||| | ||||| || |||| |||||||| Sbjct 1088057 GGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGAC 1087998 Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| || |||||||| ||||| || || Sbjct 1087997 GAACTTCTTTGAGAAGCGTGTCGGTGACTA 1087968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260619658640