Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq57 113 4e-20
seq101 107 2e-18
seq124 95.1 1e-14
>seq57
Length=3318891
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | ||| | || | |||| ||||| || ||||||||||||||
Sbjct 1505194 CCACCACGCAGACGAAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTG 1505135
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || |||||||||||| || |||| |||| || |||||||| || |||||
Sbjct 1505134 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGA 1505075
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| || || ||| || || | | || | ||| |||| ||| ||||||
Sbjct 1505074 ATACCTTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACC 1505015
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || ||||| || || || || || || |||||
Sbjct 1505014 TCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| || | ||| | || | || | | | |||||||| |||||||||||||| |
Sbjct 1505422 CCGCCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAC 1505363
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||| || || || ||||| | |||| || ||||| ||||| || ||
Sbjct 1505362 AAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGA 1505303
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || ||||| ||| | || | || |||| || | ||| ||| | ||||| |
Sbjct 1505302 ATACCCTCCTTGTC-CTGAATCTTGGACTTCACATTG-TCAATGGTATCGCTGGACTCGA 1505245
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || || || ||||| || ||||| ||||||||
Sbjct 1505244 CCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196
>seq101
Length=1115905
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||||||| || || |||||||| || || || | |
Sbjct 940046 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 939987
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| |||||||| || || || || ||||| ||| || || |
Sbjct 939986 AAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 939927
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| ||||||||||| | || | ||| || || || || || ||
Sbjct 939926 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTG 939867
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 939866 ACGAAGATCTGCAT 939853
>seq124
Length=1203342
Score = 95.1 bits (104), Expect = 1e-14
Identities = 295/450 (66%), Gaps = 19/450 (4%)
Strand=Plus/Minus
Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCA 52455
|||| | || |||||||| ||||||||| | || || || ||||||| |||
Sbjct 1088406 AGCGTCTCGTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCA 1088347
Query 52456 TCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATAT 52515
|||| | | || | | || | ||||| || ||||| ||| ||||||| | || |
Sbjct 1088346 TCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCT 1088287
Query 52516 CGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCT---ACT---ACAAGACGCGC- 52568
| || || || || || ||||| |||||||| |||||| ||| || | | ||
Sbjct 1088286 CTCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTCCTTCACTCTCACCTCAAGGGCC 1088227
Query 52569 GTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATC 52628
||| | || | | || || ||| | ||| ||| || || || | ||
Sbjct 1088226 GTGCTAGCAA----GCA---GGTCA---TCCAGGACATCATCACTGATGCCGTCACCATT 1088177
Query 52629 GAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC 52688
|| ||||||| | || | || || || | || || ||||||||||| | |
Sbjct 1088176 GAGCAGGAGTTCCTGACTGAGGCTCTCCCCTGTGCCCTCCTCGGCATGAACGCAGACCTC 1088117
Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AA 52747
||| ||||||||||||| || || || ||||| |||| ||| |||| | | ||
Sbjct 1088116 ATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTGGTCGCCCTC-GGCAACGACAA 1088058
Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807
| || ||| || ||| || || || || ||| | ||||| || |||| ||||||||
Sbjct 1088057 GGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGAC 1087998
Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||| || |||||||| ||||| || ||
Sbjct 1087997 GAACTTCTTTGAGAAGCGTGTCGGTGACTA 1087968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260619658640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |