Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq57 125 7e-24
seq124 116 4e-21
seq101 113 4e-20
seq179 105 6e-18
>seq57
Length=3318891
Score = 125 bits (138), Expect = 7e-24
Identities = 141/186 (76%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| ||||| ||| | | || || ||| || ||||| ||||||
Sbjct 1504936 GTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCAAGCTGCTTTCCA 1504877
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| ||||||||||| ||||| ||||||||||||||| ||| ||| ||||
Sbjct 1504876 GCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 1504817
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| ||||| ||| ||||| | | ||| || |||| ||| | || ||||||||||| ||
Sbjct 1504816 ACGTTGT-CGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGT 1504758
Query 127096 TTTTAC 127101
|| ||
Sbjct 1504757 CTTGAC 1504752
Score = 107 bits (118), Expect = 2e-18
Identities = 131/176 (74%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||||||| | ||||| ||| || ||||| ||||||
Sbjct 1504660 GTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCA 1504601
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| ||||||||||| ||||| ||||||||||||||| || ||| |||
Sbjct 1504600 GCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTA 1504541
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091
| |||| |||| ||| |||| ||| || |||| ||| | || ||||| ||||
Sbjct 1504540 ACGTTG-TCGATGGTATCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCA 1504486
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| ||||| || || |||||| || || ||||| || |||
Sbjct 1505392 GTCGACTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCTTCCAGCTGCTTACCA 1505333
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | ||||||||| ||||| || || |||||||||||| || || |||
Sbjct 1505332 GCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTC 1505273
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | ||| || | |||||| || | || | || || ||||| |||||
Sbjct 1505272 ACATTGTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTC 1505213
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 1505212 TTGACAAAGATCTGCAT 1505196
>seq124
Length=1203342
Score = 116 bits (128), Expect = 4e-21
Identities = 348/528 (66%), Gaps = 23/528 (4%)
Strand=Plus/Minus
Query 47061 GAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAA 47120
|||| ||| |||||| | |||| |||||||| ||||| || | ||| | || |
Sbjct 1088482 GAGACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCTATCCGATGGATTCAGGACAAG 1088423
Query 47121 AAC--GTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178
|| ||| || || | | ||| | |||| ||||| |||||||||| ||||||||
Sbjct 1088422 GACTCGTC-CTTTGCTC-AGCGTCTCGTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCA 1088365
Query 47179 CGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGT 47238
|| |||||| | || || | | || | || | ||||| || || || |
Sbjct 1088364 GTGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCT 1088305
Query 47239 TTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACT 47298
| ||||||||| ||||| | || || || || |||||| |||||||||| |||
Sbjct 1088304 TCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTC---- 1088249
Query 47299 ACAACACTAGAGTCGATCAAAAGTTGGACGTGC---CCACC--GTCAGC---GACATGTT 47350
| |||| || | | ||| || ||||| | | | |||| | ||||| |
Sbjct 1088248 -CTTCACTC---TC-ACCTCAAG--GGCCGTGCTAGCAAGCAGGTCATCCAGGACATCAT 1088196
Query 47351 TGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGT 47410
| || |||||| |||||||| |||||| | | |||||||| ||| | | |
Sbjct 1088195 CACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACTGAGGCTCTCCCCTGTGCCCTCCT 1088136
Query 47411 GGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGT 47470
|| |||||||| || | |||| |||||||||| || ||||||||||| || || ||
Sbjct 1088135 CGGCATGAACGCAGACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTGGT 1088076
Query 47471 TCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACAT 47530
|| | |||| | ||| | || || || ||||| || ||| | |||||
Sbjct 1088075 CGCCCTCGGCAACGACAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACAT 1088016
Query 47531 TTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
|| || | |||||||| ||||| || |||||||| ||||| || ||
Sbjct 1088015 CTCCCTTGGTGGCAAGACGAACTTCTTTGAGAAGCGTGTCGGTGACTA 1087968
>seq101
Length=1115905
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || | |||| || | || ||||| || || || ||||| |||
Sbjct 940082 GCACCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 940023
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || ||||| ||| || ||||| || ||||| |||| | |||||||| || ||
Sbjct 940022 CTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGG 939963
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062
|| ||||||||||||||| ||| || ||||| |||| |||| |||||| | | |||
Sbjct 939962 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCGGAAGACTC 939904
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | ||| | ||| || || || || || || || || ||||||||
Sbjct 939903 CACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853
>seq179
Length=1234945
Score = 105 bits (116), Expect = 6e-18
Identities = 112/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017
||| || ||||| || |||||| |||||| |||||||||||| || || |||||||||||
Sbjct 140930 ATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGATCCGGGGGGATGCCCTCCTT 140871
Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
|||| ||| || ||||| | || | |||||||| |||||| |||| ||| |
Sbjct 140870 GTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGAT 140811
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
|| ||||| ||||| || || || |||
Sbjct 140810 GGTCTTGCCCGTCAGGGTCTTCACGAAA 140783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499094140880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |