Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq101 86.0 6e-12
seq57 84.2 2e-11
>seq101
Length=1115905
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || ||||| ||||| || || ||||| | ||| ||| ||
Sbjct 940061 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 940002
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || || || || | || | || ||||||||||| |||||||| || || || ||
Sbjct 940001 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 939942
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || |||| || | || | ||||||||||||||| || || || || | ||| ||
Sbjct 939941 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 939883
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || || || || || ||||||
Sbjct 939882 CCCTGTGAGGGTCTTGACGAAGATCTGCATC 939852
>seq57
Length=3318891
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || ||||| ||||||||||| ||||| || || ||||||| ||| || ||
Sbjct 1505176 ACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCG 1505117
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||| || || ||| | || | ||| || || || || ||||| ||||| ||||| ||
Sbjct 1505116 AGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGG 1505057
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || || | || | || | ||| ||||| || || || || || || | || ||
Sbjct 1505056 ATCTTCGACTTCA-CGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCTT 1504998
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||||||
Sbjct 1504997 TCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452001578438520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |