Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq257 188 9e-43 seq124 165 1e-35 >seq257 Length=3268735 Score = 188 bits (208), Expect = 9e-43 Identities = 914/1428 (64%), Gaps = 47/1428 (3%) Strand=Plus/Minus Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 ||||| || |||||| || | | | |||||||||| ||||| ||||| ||||||||| Sbjct 718817 AACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCA 718758 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 |||||||||||||| || | ||| ||| ||||||||||| || | || || |||||| Sbjct 718757 TTGTTACCCAAGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTG 718698 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 116055 || | ||| | || | | | ||| |||| | |||||||| || | | | Sbjct 718697 CGAATACCGTGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAGAGGTCAGAGGGC 718638 Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115 | | | | |||||| ||||||||||| || || | || || || || |||| || || Sbjct 718637 TTCACGTTCCACATGTCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTA 718578 Query 116116 TCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172 || |||||||| ||| |||| | |||| || ||||| ||||| || Sbjct 718577 GAGTAGGGGCCCTCCTCCTTGGCCAGCTGCACGGA---AGCGGTAAGGGCAGCGTGGTAG 718521 Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCGAGAC 116230 || ||||| || || | || | || || | |||||| ||| || || | | | Sbjct 718520 ATGGTCTCGAAGATCTGCTTGTTGA--GCTCTCGAGCCTCGGGGGACTCGAAAGGCATGC 718463 Query 116231 GGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 116289 ||| | || || |||| || ||||| || ||||||| || || || || |||| | Sbjct 718462 -GCAGAGCAAGGAAAGCATCGGCAAGACCCTGAACACCGACACCGATGGGTCGGTGTCGC 718404 Query 116290 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349 || || || ||||| ||||| || ||| ||| || | ||| || || Sbjct 718403 ATGTTGCTGTTGCGAGCTTCGGGAACGGGGTAGTGGTTCACATCAATGATCCTGTTCAGG 718344 Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 116409 || |||| || ||||| || || ||||| | | | ||| | || | ||| Sbjct 718343 TTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATA---GCAGGCCTCG 718287 Query 116410 TCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 116466 ||| |||| | |||||||| | || || || || || |||| |||||| Sbjct 718286 TCATAGTTGATGAAAGAGGGAAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCA 718227 Query 116467 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 116526 || |||||| |||||||| || || | || || || |||||| |||| |||| Sbjct 718226 GGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTC 718167 Query 116527 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCC 116586 || || || ||| ||| || ||||||||| ||||| | || | || ||||| Sbjct 718166 TTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCAGTCTCG 718107 Query 116587 GTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCG 116645 || || | || || || || | ||| | | || | ||| || ||| || || Sbjct 718106 GTCTGAGCCTCAAGGATGGCATACCAGAGCTTCTG-GGCCTTCA---TGGTCTT---ACG 718054 Query 116646 CCCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CT 116698 |||| ||| ||| ||||| || || ||||| ||||| ||| || ||| | Sbjct 718053 ACCCTTACCGGCCTTCTCATACTTCTCATACAGAGCCTCGAACTCCTCA-CCGTAGCAGT 717995 Query 116699 CTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCC 116758 | | ||| || || || | || || | ||| | ||| | ||| || |||||| | Sbjct 717994 CGGCGAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACAC 717935 Query 116759 GCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTT 116818 ||||||||||||| || ||||||||||| ||| ||| || || ||| ||| | || | Sbjct 717934 GCTTCATGAAGAGATCGGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCT 717875 Query 116819 CATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCA 116878 | | || || || |||| || | || || | || ||| |||||||| || || | Sbjct 717874 CCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAA 717815 Query 116879 GGTACACCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTT 116934 |||| | || | | ||| | || | | ||| |||| | || || | || || Sbjct 717814 GGTAGATGGCAAAGGCACCAGGTCGCTTGTTG-CCACCCTGATCGACGTATCGGGCAGTG 717756 Query 116935 GCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-A 116992 ||| || || |||||||| || ||| ||| | || || || || || ||| Sbjct 717755 TTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATG 717696 Query 116993 TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTG 117052 || ||| | |||| | || | ||| | || || |||||||| || ||| ||| | Sbjct 717695 TAAGAGCC--AGTGGCACGGATACGGTGCACGTTCAGGCCAATACCACCAGCCATCTTGG 717638 Query 117053 AGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTG 117112 | || || || | ||||| | | ||||| || || || ||| |||| | Sbjct 717637 AAATCATGGCACAGGTCTTGAGAGTATCATAGATACCCTCAATACTGTCCTCCTTCATGT 717578 Query 117113 CGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTG 117172 ||| |||||||| || | || ||| || ||||| || ||||| ||||| || | Sbjct 717577 CGACAAGGAAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGG 717518 Query 117173 TCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAAT 117230 || || ||| | | |||| ||||| | ||| ||||| | |||| ||| Sbjct 717517 AGGCATGAGTGA--AGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAAT 717460 Query 117231 GTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 || || || || || | ||||| ||||| | ||||| |||||| Sbjct 717459 GTTGTCACCCCAGATGCCAACAGAGACACGCATGATCATGTGTTGGGG 717412 >seq124 Length=1203342 Score = 165 bits (182), Expect = 1e-35 Identities = 538/821 (66%), Gaps = 31/821 (4%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| |||||||| |||||||| ||||| ||| | ||| ||| |||||||| Sbjct 1087967 GTAGTCACCGACACGCTTCTCAAAGAAGTTCGTCTTGCCACCAAGGGAGATGTTCTCCAT 1088026 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 127344 || || || ||||| | | || | | | |||| | | | | | || Sbjct 1088027 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTGTCGTTGCCGAGGGCGACC------AG 1088080 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 |||||| || | |||| |||| ||||||| ||| || | |||||| |||| ||| Sbjct 1088081 GAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCTGCGTTCATGCCGAGGAG 1088140 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 | ||| ||||| || || | |||| ||| ||||||| || || || | ||| Sbjct 1088141 GGCACAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGAT 1088200 Query 127465 GGCGTGAATAGTGTCCACCCCAG---GTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGC 127521 | | || || | | | || | | ||| | || | | ||| || || Sbjct 1088201 GTCCTGGATGACCTGCTTGCTAGCACGGCCCTTGAGGTGAGAGTGAAGGAGG--CAG-GC 1088257 Query 127522 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 127581 ||| || ||| |||||||| ||||| |||||||| || || |||||| |||||| || Sbjct 1088258 AAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGG 1088317 Query 127582 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 127641 ||||||||| |||||||| | |||||| || | ||| | ||| ||||||||| || Sbjct 1088318 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGATGCC 1088377 Query 127642 CTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACC 127700 ||| || ||||| || | ||||||| |||||||| || | | |||| | || || Sbjct 1088378 CTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGA-CGAGTCCTTGTCCTGAATCC 1088436 Query 127701 ACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGA 127760 | || ||||| | ||||| || ||| || |||| ||||| || || | |||| Sbjct 1088437 ATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGA 1088496 Query 127761 GTTCCTTCTTTTCT--GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 127818 | | | || || || || || |||||||| | || ||||| || || || || Sbjct 1088497 GGT--ATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTC 1088554 Query 127819 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 127877 | ||||| | | ||| || | ||| | ||||||| | || || || |||| Sbjct 1088555 GGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATCT 1088613 Query 127878 GTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936 | ||||| | || ||| | | | | ||||| || || || || || |||| Sbjct 1088614 GAACCTC-GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672 Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993 || || || ||||| | ||||| ||| || | ||| || | |||||| Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732 Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||| ||||||||| || ||||| | |||||| |||||||| Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCA 1088773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504999042920