Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq101 120 3e-22
seq179 111 2e-19
seq57 107 2e-18
>seq101
Length=1115905
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| || ||||| | || |||||||||||||| || ||
Sbjct 940044 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 939985
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||||||| | || | || |||||||||| |||||| ||||| |||
Sbjct 939984 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 939926
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| || ||||| || | ||||| || || || || || || || |
Sbjct 939925 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGA 939866
Query 46581 CAAAGATTTGCATTTTGC 46598
| ||||| ||||| ||||
Sbjct 939865 CGAAGATCTGCATCTTGC 939848
>seq179
Length=1234945
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| ||||| || | || || ||||||||||| ||||| |
Sbjct 140964 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 140905
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||| || | || | || |||||||||| |||||| ||||| |
Sbjct 140904 TCAGTCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 140845
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||| || || || || | |||||||| ||||||||||| || || || |
Sbjct 140844 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 140785
Query 46584 A 46584
|
Sbjct 140784 A 140784
>seq57
Length=3318891
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || |||||||| || | ||||| |||| || |||||||| || |||||
Sbjct 1505387 CTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAA 1505328
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||||| || | | |||||||||| ||||| ||| | |
Sbjct 1505327 GATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTCACATT 1505268
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || ||||| || || || |||| |||||||| || || || || || || ||
Sbjct 1505267 GTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGAC 1505208
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 1505207 AAAGATCTGCAT 1505196
Score = 105 bits (116), Expect = 8e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||| ||||| || |||| ||||| ||||||||||||||
Sbjct 1505158 TCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 1505099
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | ||||| || || | || | | ||||| ||| ||||||| ||| | |
Sbjct 1505098 ATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGGATCTTCGACTTCACGTTA 1505039
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | || ||| ||||||||| || | |||||||| || || || || || || ||
Sbjct 1505038 TCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACG 1504979
Query 46583 AAGATTTGCAT 46593
|||||||||||
Sbjct 1504978 AAGATTTGCAT 1504968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565236372207240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |