Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq124 237 2e-57 seq101 122 9e-23 seq57 113 5e-20 seq179 105 7e-18 >seq124 Length=1203342 Score = 237 bits (262), Expect = 2e-57 Identities = 560/834 (67%), Gaps = 35/834 (4%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 |||||||| || || || || || | | ||| ||| | ||| || || ||||||||| Sbjct 1087983 TTCTCAAAGAAGTTCGTCTTGCCACCAAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1088042 Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||| |||| |||||| || |||| || || | |||||| |||||| Sbjct 1088043 GTGGCCTTGTAGACCTTGTCGTTGCCGA---GGGCGACCAGGAGACGGTCGGCGACGAAC 1088099 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTTC 132800 |||||||| ||| |||| || || | || || || |||| || || || || Sbjct 1088100 TCGATGTACTGCTTCATGAGGTCTGCGTTCATGCCGAGGAGG-GCACAGGGGAGAGCCTC 1088158 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 || || || ||||| |||| ||| || || |||| ||| ||| | | | | Sbjct 1088159 AGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGTCCTGGATGACCTGCTT 1088218 Query 132861 GCT----CGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGC 132916 ||| ||||| ||| | | |||| | ||| ||||||||| || | | Sbjct 1088219 GCTAGCACGGCCCTTGAGGTGAGAG--TGAAGG--AGGCAGGCAAAGTCGGTGTGAAGAC 1088274 Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || | || ||||| |||||| ||| |||| || |||||||| || || || | Sbjct 1088275 CCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCT 1088334 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 ||||||| || |||| ||| || || ||||||| |||||||||||| ||||| | Sbjct 1088335 TGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCGAAGG 1088394 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGATCCAGCGCAGCGCCCATTC 133094 | || || |||| | || | | || ||| ||| ||||| || | ||||| || Sbjct 1088395 CGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA--ATCCATCGGATAGCCCAGTC 1088452 Query 133095 GGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC 133154 |||||| | || ||| || || || || |||||||| || | | | ||| || Sbjct 1088453 GGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAG--GTATGTTCGCT-- 1088508 Query 133155 CGAGGAACGCAC------GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTT 133208 ||| || || | ||||||||| ||||| || || | || ||||| | ||| Sbjct 1088509 -GAG-AAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGATGTT 1088566 Query 133209 CTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC 133268 |||||| ||| || |||||||| ||||| || ||||| | ||| || || Sbjct 1088567 CTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATCTGAACCTCGCCGCT 1088626 Query 133269 GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCAC 133328 ||| ||||| || || || ||||||||||||||||| ||| ||||| ||||| || | Sbjct 1088627 GAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAGGCAAGGAT 1088686 Query 133329 GTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTT 133385 ||| |||||| |||||| | ||| ||| | ||||||| | ||||| Sbjct 1088687 GTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAGTCGTGGAGATCCTT 1088746 Query 133386 GGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||||| || | ||||||| | ||||| || || |||||||| || |||||||| Sbjct 1088747 GGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 1088800 >seq101 Length=1115905 Score = 122 bits (134), Expect = 9e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| || || || |||||| | || || ||| | Sbjct 939850 AAGATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 939909 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| |||||| | || Sbjct 939910 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 939968 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | || ||||| ||||| || || | |||||||| | |||||| Sbjct 939969 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 940028 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| | || || || |||| || || Sbjct 940029 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCG 940067 >seq57 Length=3318891 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || |||||||| | || |||||| ||| | Sbjct 1505196 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1505255 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || || | ||||| ||||| |||||| ||||||| Sbjct 1505256 GATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 1505315 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| |||| |||||| | ||||||||| Sbjct 1505316 CAGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAAC 1505375 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || ||||| |||| || || | ||||| ||| | | ||||| Sbjct 1505376 ATTCAGAAGGAGTCGACCCTTCACCTTGTGCTCCGTCTCCGTGGCGG 1505422 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || ||||||||| | || || || | || Sbjct 1504968 ATGCAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCC 1505027 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| || || || || ||||| | || || Sbjct 1505028 GATACCATCGATAACG-TGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCA 1505086 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| ||||| || || || |||| || || |||| ||||||||| Sbjct 1505087 ACAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACAA 1505146 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| |||||| | || ||||| | || || ||| || | || || Sbjct 1505147 CATCCAGAAGGAATCAACTCTGCACCTTGTTCTTCGTCTGCGTGGTGG 1505194 >seq179 Length=1234945 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 140784 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 140843 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| | || || ||||| || Sbjct 140844 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGACTG 140903 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| ||||| || || | || || ||| ||||||||||||||| ||| Sbjct 140904 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 140963 Query 38433 G 38433 | Sbjct 140964 G 140964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171005630080