Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq124 237 2e-57
seq101 122 9e-23
seq57 113 5e-20
seq179 105 7e-18
>seq124
Length=1203342
Score = 237 bits (262), Expect = 2e-57
Identities = 560/834 (67%), Gaps = 35/834 (4%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
|||||||| || || || || || | | ||| ||| | ||| || || |||||||||
Sbjct 1087983 TTCTCAAAGAAGTTCGTCTTGCCACCAAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1088042
Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | |||||| |||| |||||| || |||| || || | |||||| ||||||
Sbjct 1088043 GTGGCCTTGTAGACCTTGTCGTTGCCGA---GGGCGACCAGGAGACGGTCGGCGACGAAC 1088099
Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTTC 132800
|||||||| ||| |||| || || | || || || |||| || || || ||
Sbjct 1088100 TCGATGTACTGCTTCATGAGGTCTGCGTTCATGCCGAGGAGG-GCACAGGGGAGAGCCTC 1088158
Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860
|| || || ||||| |||| ||| || || |||| ||| ||| | | | |
Sbjct 1088159 AGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGTCCTGGATGACCTGCTT 1088218
Query 132861 GCT----CGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGC 132916
||| ||||| ||| | | |||| | ||| ||||||||| || | |
Sbjct 1088219 GCTAGCACGGCCCTTGAGGTGAGAG--TGAAGG--AGGCAGGCAAAGTCGGTGTGAAGAC 1088274
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
|||| || | || ||||| |||||| ||| |||| || |||||||| || || || |
Sbjct 1088275 CCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCT 1088334
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
||||||| || |||| ||| || || ||||||| |||||||||||| ||||| |
Sbjct 1088335 TGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCGAAGG 1088394
Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGATCCAGCGCAGCGCCCATTC 133094
| || || |||| | || | | || ||| ||| ||||| || | ||||| ||
Sbjct 1088395 CGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA--ATCCATCGGATAGCCCAGTC 1088452
Query 133095 GGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC 133154
|||||| | || ||| || || || || |||||||| || | | | ||| ||
Sbjct 1088453 GGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAG--GTATGTTCGCT-- 1088508
Query 133155 CGAGGAACGCAC------GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTT 133208
||| || || | ||||||||| ||||| || || | || ||||| | |||
Sbjct 1088509 -GAG-AAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGATGTT 1088566
Query 133209 CTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC 133268
|||||| ||| || |||||||| ||||| || ||||| | ||| || ||
Sbjct 1088567 CTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATCTGAACCTCGCCGCT 1088626
Query 133269 GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCAC 133328
||| ||||| || || || ||||||||||||||||| ||| ||||| ||||| || |
Sbjct 1088627 GAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAGGCAAGGAT 1088686
Query 133329 GTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTT 133385
||| |||||| |||||| | ||| ||| | ||||||| | |||||
Sbjct 1088687 GTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAGTCGTGGAGATCCTT 1088746
Query 133386 GGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|||||| || | ||||||| | ||||| || || |||||||| || ||||||||
Sbjct 1088747 GGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 1088800
>seq101
Length=1115905
Score = 122 bits (134), Expect = 9e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||| || || || |||||| | || || ||| |
Sbjct 939850 AAGATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 939909
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || |||| ||||| ||||| |||||| | ||
Sbjct 939910 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 939968
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| ||||| | || ||||| ||||| || || | |||||||| | ||||||
Sbjct 939969 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 940028
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| ||||| | || || || |||| || ||
Sbjct 940029 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCG 940067
>seq57
Length=3318891
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| || || |||||||| | || |||||| ||| |
Sbjct 1505196 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1505255
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || || || | ||||| ||||| |||||| |||||||
Sbjct 1505256 GATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 1505315
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| || || |||||||| |||| |||||| | |||||||||
Sbjct 1505316 CAGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAAC 1505375
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| || ||||| |||| || || | ||||| ||| | | |||||
Sbjct 1505376 ATTCAGAAGGAGTCGACCCTTCACCTTGTGCTCCGTCTCCGTGGCGG 1505422
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| || || ||||||||| | || || || | ||
Sbjct 1504968 ATGCAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCC 1505027
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || |||| || || || || ||||| | || ||
Sbjct 1505028 GATACCATCGATAACG-TGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCA 1505086
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || || | ||| ||||| || || || |||| || || |||| |||||||||
Sbjct 1505087 ACAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACAA 1505146
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| |||||| | || ||||| | || || ||| || | || ||
Sbjct 1505147 CATCCAGAAGGAATCAACTCTGCACCTTGTTCTTCGTCTGCGTGGTGG 1505194
>seq179
Length=1234945
Score = 105 bits (116), Expect = 7e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | |
Sbjct 140784 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 140843
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| || ||| | || || ||||| ||
Sbjct 140844 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGACTG 140903
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| ||||| ||||| || || | || || ||| ||||||||||||||| |||
Sbjct 140904 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 140963
Query 38433 G 38433
|
Sbjct 140964 G 140964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171005630080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |