Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq223 280 2e-70
>seq223
Length=4967455
Score = 280 bits (310), Expect = 2e-70
Identities = 443/632 (70%), Gaps = 12/632 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || || |||| || || || ||||||||
Sbjct 2329888 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTCGACTTAACCTCGAAGATACCC 2329947
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | |||||||| || ||||||||||| || || || ||||| |||
Sbjct 2329948 TCCTCAATGGTCAGGAGAGAAACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACG 2330007
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | || | ||||| ||||||||||| ||||| || || || || || ||
Sbjct 2330008 TTGCGCTCACCCTCGATCTTCTTGTCGAGACCGTAGGCGATGGCGGCGGCAGTAGGCTCG 2330067
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || ||| ||| || ||||||||| | ||||| || || || || ||
Sbjct 2330068 TTGATGATTCGGAGAACGTTGAGACCAGCAATAAGACCGGCATCCTTGGTAGCCTGACGC 2330127
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| |||||||| ||||| || ||||| |||| |||| ||| ||| ||
Sbjct 2330128 TGAGAGTCGTTGAAGTAGGCAGGGACGGTAACGACAGCGTTGTTGACGGTCTCACCAAGG 2330187
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || ||| | ||| ||| || || || ||||| || || ||||| |||| |
Sbjct 2330188 TAAGACTCGGCGGTCTCTCGCATCTTTGTGAGGACCATGGAAGAGATCTCCTCAGGGGTG 2330247
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873
|| ||| | || || || || ||||| ||||| || || || || |||| |
Sbjct 2330248 AAGGTCTTCTTCTCGCCCTTGAACTCAACCTCAATGATAGGCTT----GC--CACCCTTG 2330301
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
||| | ||| | | | | ||||| ||| | ||||||| || |||||
Sbjct 2330302 TCGATGATCTTGAAAGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCATCGCTGAACTTG 2330361
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| ||||| | |||||| ||||| || || ||||| | |||||||||||| ||||||
Sbjct 2330362 CGACCGATCAAACGCTTGGCATCGAAGACAGTGTTGTGGGGGTTCATGGCGACCTGGTTC 2330421
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || || || ||||| ||||| || | || || || ||||| | || || ||
Sbjct 2330422 TTGGCGGCATCACCGATCAGACGCTC---GGTGTCGGTGAAACCGACGAAGGAGGGAGTG 2330478
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085
||||| || || |||||||| || ||||| ||
Sbjct 2330479 GTTCGGTTACCCTGGTCGTTGGCGATAATGTC 2330510
Score = 140 bits (154), Expect = 4e-28
Identities = 345/519 (66%), Gaps = 11/519 (2%)
Strand=Plus/Plus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| ||||| |||||||| ||||| | ||| || | || ||| | | ||
Sbjct 1946227 AGGTCCTCGAAACGGGCACGGGTGATGGACATGGTGAAGTCCTCACCATCGAAGAGAGAG 1946286
Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363
||||| |||||||| | || || ||||| | || ||||| || ||||| || ||
Sbjct 1946287 TCAATCTCAATGGTGGCCTGGGCACCGGAAGAGAGGGTACGCTTGGCACGCTCGCAAGCA 1946346
Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423
||||| | ||| || || ||||| || | | || | || ||||| || || |
Sbjct 1946347 GTTCGGAGACGTCGGAGAGCACGGGGATCGTCAGACAGGTCCTTCTTGGTCTTGCGGCTG 1946406
Query 7424 AACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482
||||| | | |||| |||| |||| | | ||||| || | ||||| || || ||
Sbjct 1946407 AACTCCTTCTTGCAGTGCTCGA-GGAGGTTGGTGTCGAAGTCCTGGCCACCTAAATGGGT 1946465
Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542
|| || ||||| || ||||| |||| ||| || | ||||| | | || |||||
Sbjct 1946466 GTCACCAGCGGTGGCCTTGACAGTGAAGACACCACCCTGGATGTTGAGGAGGGAGACATC 1946525
Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATC 7602
|| ||||||||||| || || | ||||| ||||| || | ||| | ||| |
Sbjct 1946526 GAAAGTACCACCACCGAGATCGTAGATGAGAACGTTGCGCTC--CTTCTCAG-ACTTGCC 1946582
Query 7603 G------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
| |||||||| ||||| || || || || || || || || ||||| || |||
Sbjct 1946583 GGAGCCAAGACCGTAGGCGATGGCGGCAGCAGTAGGCTCGTTGATGATACGGAGGACGTT 1946642
Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716
|| || || || | | || || || || || ||||| || ||||| ||||||||
Sbjct 1946643 GAGACCGGCGATGGAACCGGCGTCCTTGGTGGCCTGTCGCTGGTTGTCGTTGAAGTAGGC 1946702
Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||||| || | ||| || | | || ||||| || ||
Sbjct 1946703 AGGGACAGTGATGACGGCCTTCTCAACCTTCTTGCCAAG 1946741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635130521461080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |