Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq257 206 3e-48 seq248 167 3e-36 seq124 123 3e-23 seq90 104 3e-17 seq223 86.0 7e-12 >seq257 Length=3268735 Score = 206 bits (228), Expect = 3e-48 Identities = 1013/1593 (64%), Gaps = 53/1593 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 ||||| |||||||| ||||| ||| || || || ||||| | || || ||| Sbjct 719036 GACTGGGACTGATCAATGAAGGCACCTCGGTCGGCGGCCATCTGGACGACCTGGCGCTGG 718977 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626 ||| ||||| || |||||||| | | ||||| || ||||||||| |||||| Sbjct 718976 GAAATCTCCCAAACGGTCTTGTAGAGAGCCTTGACCTCGGCGGGAATGTTGGGGATGTTC 718917 Query 109627 TGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGACCG 109683 || || || ||| || | |||| | | |||||| | |||||| || || Sbjct 718916 TGGATGGA---ACCGTTCTCGGCAATGATTCGGTTCTTCATAGAATCCGACCACAGGCCC 718860 Query 109684 ACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTG 109743 | | |||||| | | || |||||| || || || ||||| || Sbjct 718859 ATGTCGACGAGATCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACA 718800 Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803 || || |||||||||| | ||||| || ||||| ||||||||||| || | ||| || Sbjct 718799 CGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTGC 718740 Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTT 109863 | |||| || ||||||||||| || | || |||||||| || | ||| | | ||| Sbjct 718739 GAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATACCGTGCTCCTTG 718680 Query 109864 ACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCAC 109923 ||| |||| | | | ||||| || | | || | || | | |||| Sbjct 718679 ACCTGCTCCCTGAGAGACTCCCAGTCCCAGAGGTCA------GAGGGCTTCACGTTCCAC 718626 Query 109924 ATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCC 109983 || || || || | ||||||| |||||||| |||||||| | ||| | ||| Sbjct 718625 ATGTCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTAGAGTAGGGGCCC 718566 Query 109984 TCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATA 110043 || ||| ||||| || ||||| || || || || || || ||||| || || Sbjct 718565 TCCTCCTTGGCCAGCTGCACGGAAGCGGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATC 718506 Query 110044 TGAGCATTCATGAG---GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAA 110099 || || |||| |||| ||| | ||||| || | | || || || || Sbjct 718505 TG---CTTGTTGAGCTCTCGAGCCTCGGGGGACTCGAAAGGCA-TGCGCAGAGCAAGGAA 718450 Query 110100 CACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCG 110159 |||| || |||||||||||||||| ||| ||||| || || |||||| | || Sbjct 718449 AGCATCGGCAAGACCCTGAACACCGACACCGATGGGTCGGTGTCGCATGTTGCTGTTGCG 718390 Query 110160 AGCAGTTTC---TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCAC 110216 ||| ||| |||||||| ||| || |||| || || || || || Sbjct 718389 AGC---TTCGGGAACGGGGTAGTGGTTCACATCAATGATCCTGTTCAGGTTGCGAACGAC 718333 Query 110217 AGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA--CGTTTTCGTC-TCCTTATTGAC 110273 ||||| |||| || || || || | | | || | | ||||| | || ||| Sbjct 718332 AGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATAGCAGGCCTCGTCATAGTTGATGAA 718273 Query 110274 ATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTA 110333 | | ||| || |||| ||| ||||| ||||| |||| | ||| || | | ||| Sbjct 718272 AGA---GGGAAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCAGGGGCACAGTA 718216 Query 110334 TTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGA 110393 || | |||||| || || | |||||| || |||| ||||| ||||||||| || Sbjct 718215 CTCGATAATTTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCT 718156 Query 110394 TTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTT 110453 ||| |||||| |||||| || |||||| | ||| ||||||| || ||||| | || Sbjct 718155 CTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTC 718096 Query 110454 GAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTC 110510 || ||||| | ||| | | || | ||| | | || || | | ||| ||| Sbjct 718095 AAGGATGGCATACCAGAGCTTCTG-GGCCTTCATGGTCTTACG--ACCCTTACCGGCCTT 718039 Query 110511 CTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC 110570 ||| ||||| |||| |||| || |||| ||||| || | ||||| Sbjct 718038 CTCATACTTCTCATACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGGCA 717979 Query 110571 CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTC 110630 || || ||| || | ||||| ||| | || || |||||| | ||||||||| || || Sbjct 717978 CTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATC 717919 Query 110631 AGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAG 110690 || ||||| | ||| ||| ||||| || || |||| || | || ||||| Sbjct 717918 GGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTT 717859 Query 110691 GCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGA 110750 ||| || || | || || | || ||| | |||||| || || || |||| || | || Sbjct 717858 GCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGC 717799 Query 110751 TCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || | | || || |||| | || || || || ||| |||||||| | Sbjct 717798 ACC---AGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACG 717742 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGC 110864 ||||| || | | || | ||| ||| || ||||| || || | |||| Sbjct 717741 AAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGC 717682 Query 110865 ACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CT 110923 ||| || ||| | | || ||||||||||| ||| ||| ||| ||||| | Sbjct 717681 ACGGATACGGTGCACGTTCAGGCCAATACCACCAGCCATCTTGGAAATCATGGCACAGGT 717622 Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 || |||| ||| |||| ||||| ||||| || |||| || | | || ||||| | Sbjct 717621 CT-TGAGAGTATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATG 717563 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043 | || | ||| || | || || ||||||||||| || || || | |||||| ||| | Sbjct 717562 AGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGA--A 717505 Query 111044 GACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074 || |||| ||||| |||||| || ||||| Sbjct 717504 GAACTTGCTCGACATGAGGTTGTAAGTCTCGAG 717472 >seq248 Length=2291965 Score = 167 bits (184), Expect = 3e-36 Identities = 323/465 (69%), Gaps = 24/465 (5%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| || || || || | | || | || || ||||| | ||||| ||| | Sbjct 679050 CGATCGAATCGTCCAGGTCGCATCAAGGCCTTGTCGAGCATATCCGCTCGGTTAGTACCA 678991 Query 11563 GCAATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | ||| || | || | |||| ||| |||||||||||| || || || | ||||| Sbjct 678990 GCCAGGACGACGA--CCTGCTCTCGGGTGTTGAAACCGTCCATCTCGGTAAGGATCTGGT 678933 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTCT----- 11674 | | ||| || ||||| |||||| | | || | | ||| | ||| | Sbjct 678932 TCAGAGTCGCCTCCCGCTCGTCGTTGCCACCGAATCCT--CGGCCACTCTCTTGTCGTGC 678875 Query 11675 --TACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 |||| | ||||| |||||||||||||| | |||||| || ||| ||| | | Sbjct 678874 CCTACCAATGGCGTCGATCTCATCGATGAAGATGATACAGGGAGCGTTCTTACGGCCTTC 678815 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG- 11791 | |||| || || || ||||| | |||||||| || |||||||||||||| | | Sbjct 678814 TGCGAACAGGTCTCGCACACGAGAAGGACCAACACCCACAAACATCTCAACGAATTCAGA 678755 Query 11792 -CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGA 11850 | || | ||||||| |||||| ||| |||||| ||||| |||| ||||| || Sbjct 678754 ACCGCTCA-CACTGAA-GAAGGGGACACCAGACTCGCCAGCCGTGGCCTTGGCGAGCAGT 678697 Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--AC 11908 ||||||||||||||||| | |||||| |||| || || ||||| ||||||||||| | Sbjct 678696 GTCTTACCCGTACCAGGGGGACCAGCCAGAATTGCTCCTCGGGGAATCTTGGCACCGAGC 678637 Query 11909 TTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 ||| |||| | |||||||| ||| | |||| ||||| |||| Sbjct 678636 TTCTCAAACT---TCTCAGGCTGCTTCAAGAAGCTCACAAACTCC 678595 >seq124 Length=1203342 Score = 123 bits (136), Expect = 3e-23 Identities = 211/301 (70%), Gaps = 5/301 (2%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || ||||| |||||||||||||| || |||| || || Sbjct 1088255 GGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 1088314 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||| || | ||||| ||||| ||||||| ||| ||| |||||||| Sbjct 1088315 AGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGAT 1088374 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC--GAA 119671 |||||| || ||||| |||| ||||||| ||| ||||| |||| |||||| ||| Sbjct 1088375 GCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGC-AAAGGACGAGTCCTTGTCCTGAA 1088433 Query 119672 -CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 ||| || |||||||| |||||| |||||||||| || | ||||| | || Sbjct 1088434 TCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGA 1088493 Query 119731 AAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCT 119790 | || | | | || | ||||| || || | |||||||| ||||||||||| Sbjct 1088494 AGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCT 1088553 Query 119791 C 119791 | Sbjct 1088554 C 1088554 >seq90 Length=1447030 Score = 104 bits (114), Expect = 3e-17 Identities = 217/321 (68%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAA-AG 11741 ||||||| |||||||||||| || || || |||| || || | | ||| || Sbjct 1086306 GCGTCAAGCTCATCGATGAAGACAATGGCGGGAGACTTGG-ACTTGGCAGCGGTAAAGAG 1086248 Query 11742 TTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACA 11801 || || || ||||| ||||| ||||| || || ||||| | || | |||| Sbjct 1086247 CTCGCGAACTCGCTTGGCTCCGACACCCACAAAGATCTCGTCAAACTCACTACCAGACAT 1086188 Query 11802 CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861 | | |||||| ||| | |||||||| | ||||||||| || || ||||| || || Sbjct 1086187 GTAGAAGAAGGGGACACCGGCTTCACCAGCAACGGCTCGAGCAAGAAGCGTCTTTCCGGT 1086128 Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCG 11921 ||| || | ||| | || || | || ||| | |||||||||| | | | Sbjct 1086127 ACCGGGAGGGCCAACCAGGAGAACACCCTTGGGCAACTTGGCACCAAGGTCGCTGAACTT 1086068 Query 11922 CTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACC 11981 |||||| ||||||||||| || |||| ||||| ||| || |||||||| ||| ||| Sbjct 1086067 CTCAGGGTTCTTGAGGAACTCGACAACCTCCTGAAGCTCTTCCTTGGCCTCATCGCAACC 1086008 Query 11982 CTCAACATCGGTGAAACGAGT 12002 | ||| ||| |||| || || Sbjct 1086007 ATGAACGTCGCTGAATCGGGT 1085987 >seq223 Length=4967455 Score = 86.0 bits (94), Expect = 7e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 158482 GGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGTTGGTGCGGGG 158541 || ||| | || ||||| || ||| | || ||||||| ||| || || || || Sbjct 3867899 GGCCGTATTGCTCCTCGATCTGGTCTCGCCTCCAAGCACTTCATCGACACGGGCGCTGGC 3867840 Query 158542 GTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAG 158601 |||||||| | || || | || | ||||| ||| |||||||||| || || || Sbjct 3867839 GTCATCGACGCCGACTACAGAGGCCAGGTCAAGGTCCTTCTCTTCAACCACGGCGAGTCC 3867780 Query 158602 GACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAACG 158651 ||||||||| | ||| |||| || |||||||||||||| || || || || Sbjct 3867779 GACTTTGAGATCAAGGAGGGCGACCGCATCGCACAGCTCGTCCTCGAGCG 3867730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973887048600