Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq57 93.3 5e-14
>seq57
Length=3318891
Score = 93.3 bits (102), Expect = 5e-14
Identities = 321/490 (66%), Gaps = 22/490 (4%)
Strand=Plus/Plus
Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGC-ATACCA 159362
|| || ||| | || | |||||||||| ||| || || || ||| |||| ||||||
Sbjct 655194 CAGCCCAACTCTGGTGCTCAGGGTGAGTTTGCTGGCCTTCGAGTCATC-AAGCGATACCA 655252
Query 159363 T-----CAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACAT 159417
| |||||| || | ||| || ||| || || |||| || | || || ||
Sbjct 655253 TGAGGCCAAGGAG--GGTGGTGAGAAGCGAACCGTCTGCCTGATCCCTGTCTCTGCTCAC 655310
Query 159418 GGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT 159477
|| || || ||||| || | ||||| || ||||| ||||| | ||||||||
Sbjct 655311 GGTACCAACCCTGCCAGTGCTGCCATGGCCGGCATGAAGGTTGTCCCCATTAAGTGTGAC 655370
Query 159478 G--ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGC-AATCATGAATAC 159530
| | || ||| ||| | ||||| | ||||| || ||| || || || | ||
Sbjct 655371 GGAAAGACTGGTAACTTGGACATTGAGGATCTCAAGGCCAAGTGCGCCAAGCACGCCGAC 655430
Query 159531 ATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAA 159590
|| ||| | || ||||| || || || ||| |||||| || || | |
Sbjct 655431 ----GAGCTGGCCGCCATCATGATCACCTACCCCAGTACCTTTGGTGTTTTCGAGCCTGA 655486
Query 159591 CATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGC 159650
||| ||| | || | | ||||| || | ||||||| || || | || |||||
Sbjct 655487 GGTCAAGCAGGTGTGCGACCTCGTTCACCAGCACGGTGGTCTCGTCTACATGGACGGTGC 655546
Query 159651 AAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTC 159709
|| | || || ||| | ||||| | || |||| ||| ||||| ||||| || |
Sbjct 655547 CAACATGAACGCCCAGATCGGTCTCTGCAGCCCTGGTGA-TATCGGTGCTGATGTTTGCC 655605
Query 159710 ATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTC 159769
|||| ||| | || ||||| ||||||||||| || |||||||| || ||||| || ||||
Sbjct 655606 ATCTGAACCTTCACAAGACCTTCTGTATTCCCCACGGAGGTGGTGGCCCTGGTGTTGGTC 655665
Query 159770 CTATTGGTGT 159779
| || | |||
Sbjct 655666 CCATCGCTGT 655675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588049090366320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |