Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq57 154 3e-32
seq101 147 5e-30
seq179 120 7e-22
>seq57
Length=3318891
Score = 154 bits (170), Expect = 3e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||||||||| ||||| || || || || || ||||| ||| ||||||| || || ||
Sbjct 1505177 AACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTC 1505118
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||| ||||| || |||||||||||||| ||||| || |||||||| ||||| || || ||
Sbjct 1505117 GAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTG 1505058
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||| ||||| || ||||| || || |||||| |||||||| | |||||
Sbjct 1505057 GATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCTT 1504998
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || | || || ||||| | ||||||
Sbjct 1504997 TCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968
Score = 131 bits (144), Expect = 4e-25
Identities = 159/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990
||||||||||| || ||||| || ||||| ||||| || | |||| || | || |||||
Sbjct 1505404 ACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAAG-GTGCGACCGTCTTC 1505346
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||||| |||||||||||||| || ||||| || ||||| || || ||||| ||
Sbjct 1505345 CAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTG 1505286
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTC 195108
||| || ||| || || |||||||| | | | || || || || || || | |||
Sbjct 1505285 AATCTTGGACTTCACATTGTCAATGGTATCGCTGGAC--TCGACCTCCAGAGTGATGGTC 1505228
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| || | ||| || || || | |||||
Sbjct 1505227 TTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196
>seq101
Length=1115905
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || |||||||| || || || ||||| ||| || || | ||||| |||
Sbjct 940061 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 940002
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || || ||||| || |||||||| || ||||| ||
Sbjct 940001 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 939942
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| ||| ||||| |||||||| | ||||||
Sbjct 939941 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 939882
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | || || ||||| | |||||
Sbjct 939881 CCTGTGAGGGTCTTGACGAAGATCTGCAT 939853
>seq179
Length=1234945
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| ||||||| ||||| || |||||||| || ||||||||
Sbjct 140962 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 140903
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
||||| || || || || || ||||| || ||||| || || || |||||| || |||
Sbjct 140902 AGTCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 140843
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
||||||||||| || || || ||||| | ||||| || |||| || || |||||
Sbjct 140842 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 140784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109477520228129
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |