Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq57 107 1e-18
>seq57
Length=3318891
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| || | | | || | || |||||||| || || || ||
Sbjct 1505386 TCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAG 1505327
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| |||||| || ||
Sbjct 1505326 ATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTCACATTG 1505267
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | || ||| || || | || ||||| ||||| ||||||||||| |||
Sbjct 1505266 TCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGACA 1505207
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 1505206 AAGATCTGCATA 1505195
Score = 86.0 bits (94), Expect = 4e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| || || |||||| | || |||| || ||||| ||||| |||||
Sbjct 1504654 TCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCAAAG 1504595
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | ||||||||||| ||||||| || |||
Sbjct 1504594 ATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACGTTG 1504535
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
| || | || || |||||| |||| ||| ||||| || |||||
Sbjct 1504534 TCGATGGTATCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGT 1504488
Score = 84.2 bits (92), Expect = 1e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| | ||| |||| |||| || ||||| ||||| |||||
Sbjct 1504930 TCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAG 1504871
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | ||||||||||| |||||| ||||||
Sbjct 1504870 ATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 1504811
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| || | ||| || |||| ||| || || || || || || ||||| ||
Sbjct 1504810 TCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGAC 1504752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632464492536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |