Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq223 91.5 1e-13 >seq223 Length=4967455 Score = 91.5 bits (100), Expect = 1e-13 Identities = 187/272 (69%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174 ||||| || || ||| |||| |||||| | | | ||| ||||| || || || Sbjct 3761478 AGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACATACTCGGCGCCAAAG 3761419 Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234 |||| ||||||||| |||||||| || || || || || | || | || | || || Sbjct 3761418 TGCCGCCACTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGATGGTTGAGACCG 3761359 Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTTCTCGG 30292 ||||| | || || | ||| |||||| ||||||||||||| |||| | || | | Sbjct 3761358 AGATTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGATACCAGCCTCGCTG 3761299 Query 30293 AGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30351 || ||| | |||| |||| ||||| || |||||| || ||||| | | ||||| Sbjct 3761298 AG-GCTGGT-GGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGCTCGGCGATAACGGCG 3761242 Query 30352 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||| | |||||| ||||||||||| Sbjct 3761241 CGGGTGAAGACGCGCTTGGTGGTGAGGAGGGG 3761210 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 29826 |||||| | ||| || | ||| || || || || || | || || || || || ||| Sbjct 3761865 GGAAAGTCGCGGGGTTCACGCTCCAGTTGCGTGTTGAGGGCATCGACATGGTCAAGATAG 3761806 Query 29827 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCC-GGTTCTAGCCCGGTGACGTGAGC 29885 ||||| ||||| |||| | ||| | || || || ||| | | || |||||| || Sbjct 3761805 ACGTGCGCGTCGCCCATGACGTG-AGTAAGGCTGCCAGGTACCAATTCGCAGACGTGCGC 3761747 Query 29886 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 29945 |||||||| || | | | |||||| || ||||| || || || || || |||||||| Sbjct 3761746 CATCATGTGTGTCAACAATGCGTAGCTAGCAATGTTGAACGGGACACCAAGACCCATGTC 3761687 Query 29946 CCCCGACCTCTGGTAGAGCTGACA 29969 | || | |||||||||||| || Sbjct 3761686 GCAGGATCGCTGGTAGAGCTGGCA 3761663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616170732251