Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq223 91.5 1e-13
>seq223
Length=4967455
Score = 91.5 bits (100), Expect = 1e-13
Identities = 187/272 (69%), Gaps = 6/272 (2%)
Strand=Plus/Minus
Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174
||||| || || ||| |||| |||||| | | | ||| ||||| || || ||
Sbjct 3761478 AGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACATACTCGGCGCCAAAG 3761419
Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234
|||| ||||||||| |||||||| || || || || || | || | || | || ||
Sbjct 3761418 TGCCGCCACTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGATGGTTGAGACCG 3761359
Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTTCTCGG 30292
||||| | || || | ||| |||||| ||||||||||||| |||| | || | |
Sbjct 3761358 AGATTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGATACCAGCCTCGCTG 3761299
Query 30293 AGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30351
|| ||| | |||| |||| ||||| || |||||| || ||||| | | |||||
Sbjct 3761298 AG-GCTGGT-GGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGCTCGGCGATAACGGCG 3761242
Query 30352 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
||||| | |||||| |||||||||||
Sbjct 3761241 CGGGTGAAGACGCGCTTGGTGGTGAGGAGGGG 3761210
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 29826
|||||| | ||| || | ||| || || || || || | || || || || || |||
Sbjct 3761865 GGAAAGTCGCGGGGTTCACGCTCCAGTTGCGTGTTGAGGGCATCGACATGGTCAAGATAG 3761806
Query 29827 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCC-GGTTCTAGCCCGGTGACGTGAGC 29885
||||| ||||| |||| | ||| | || || || ||| | | || |||||| ||
Sbjct 3761805 ACGTGCGCGTCGCCCATGACGTG-AGTAAGGCTGCCAGGTACCAATTCGCAGACGTGCGC 3761747
Query 29886 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 29945
|||||||| || | | | |||||| || ||||| || || || || || ||||||||
Sbjct 3761746 CATCATGTGTGTCAACAATGCGTAGCTAGCAATGTTGAACGGGACACCAAGACCCATGTC 3761687
Query 29946 CCCCGACCTCTGGTAGAGCTGACA 29969
| || | |||||||||||| ||
Sbjct 3761686 GCAGGATCGCTGGTAGAGCTGGCA 3761663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408616170732251
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |