Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq257 293 4e-74 seq124 183 6e-41 >seq257 Length=3268735 Score = 293 bits (324), Expect = 4e-74 Identities = 856/1287 (67%), Gaps = 65/1287 (5%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||||||||||||||| |||||| ||||||||| |||| | |||||||| Sbjct 718538 GTAAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG-CTCTCGAGCCTCGGG 718480 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 || ||| ||||| ||||| | | ||||| | ||||| || ||||| || |||| | Sbjct 718479 GGACTCGAAAGGCATGCGCAG-AGCAAGGAAAG-CATCGGCAAGACCCTGAACACCGACA 718422 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 |||||||| | ||||| | ||||| | ||| ||||| || ||||| || ||| | Sbjct 718421 CCGATGGGTCGGTGTCGCATGTTGCTGTTGCGA--GCTTCGGGAACGGGGTAGTGGTTCA 718364 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGAT-GACTTTAACCACCTCGGTCAGCTTCTGG 221650 | || || | |||| ||||| || || | || | |||||| |||||||||| Sbjct 718363 CATCAATGATCCTGTTCAGGTTGCGAACGACAGTCTGTGTG-ACCTCGTGCAGCTTCTGG 718305 Query 221651 ---TGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCA 221707 | || | | || || | | || || | |||| | |||||| Sbjct 718304 AAGTCATAGCAGGCCT------CGTCATAGTTGATG---------AAAGAGGGAAGGGCA 718260 Query 221708 ACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTA 221767 | ||| ||||| || || || ||||| || | |||| || || || || Sbjct 718259 AGAGAGGCAAGGTTGCAGACAGCAACCTCATCAGGGGCACAGTACTCGATAATTTCAGTG 718200 Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827 || |||||| || ||||| ||||||| || || || |||||| ||| ||| | Sbjct 718199 CAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTG 718141 Query 221828 -TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCA 221886 |||||||| ||||| ||||| |||||||| ||||||| | || || | ||| Sbjct 718140 ATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCATACCA 718081 Query 221887 GAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATAC--CCG 221941 ||| | ||||| || | | |||| || ||||| ||| ||| |||||| | Sbjct 718080 GAGCT-TCTGGGCCTT--CATGGTCTT-ACG--ACCCTTACCGGCCTTCTCATACTTCTC 718027 Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 || ||||| | | |||| |||||||| ||| | || || || ||| | ||| Sbjct 718026 ATACAGAGCCT--CGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGG 717969 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 ||||| || |||||| ||| | | || | || ||||||||| || |||||||| Sbjct 717968 CACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATCCAG 717909 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 || ||| | || || || | | || ||||||| ||||| ||| || | ||| || Sbjct 717908 AGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCA 717849 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 | |||||||| | || |||||||| ||||| || |||| ||| | || || |||||| Sbjct 717848 AGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGC 717789 Query 222182 TTGTTGCCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTA 222239 ||||||||||||||||| || ||| ||| | |||||||| ||||| | || Sbjct 717788 TTGTTGCCACCCTGATCGACGTATC--GGGCAGTGTTGTTGAAGACACGAAGCATGGGGG 717731 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299 | |||||||| ||||||||| || ||||| | || ||| | || ||| Sbjct 717730 TGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCAC---GGATAC 717674 Query 222300 TG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356 | ||| || ||| |||||||| || || || |||||||| ||| ||||||||| Sbjct 717673 GGTGCACGTTCAGGCCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAG 717614 Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416 | || ||| ||||| ||| ||||||||| | || | || || || || || | || Sbjct 717613 TATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCT 717554 Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476 | | | || || || || || ||||| ||||| ||| || || ||| | || | Sbjct 717553 GGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGAAGAACTTGCTCG 717494 Query 222477 ACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGC--ATGG 222533 |||| || | ||| ||||| | ||| | | |||||||| ||| || ||| | | Sbjct 717493 ACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGA---TGCCAACAG 717437 Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGC--TGGAGAGCAG 222591 | | |||| ||||| ||||| | ||| ||| | | | | | | ||| || Sbjct 717436 AGACACGCATGATCATGTGTTGGGGACGCTCAACA--ATCTTGCCATCAATCTTGAGGAG 717379 Query 222592 GTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAAC 222651 ||| ||| || ||||||||||| |||||||| | | | ||||| | | | | || Sbjct 717378 GTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGAC 717319 Query 222652 CACGGCGGCGTCCAGCTCCGACTTGTG 222678 | ||||| ||| |||||| |||||| Sbjct 717318 AATGGCGGAGTCAAGCTCCTCCTTGTG 717292 Score = 104 bits (114), Expect = 4e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||| || | | |||||| | ||| || ||| | || Sbjct 718830 GTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGG 718771 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||| ||||| |||| |||||| | |||||||| ||||||||||| || | Sbjct 718770 CTCGAAGCACTCATTGTTACCCAAGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAG 718711 Query 221236 CAGCAGACTGTTGCG 221250 ||||||||||||||| Sbjct 718710 CAGCAGACTGTTGCG 718696 >seq124 Length=1203342 Score = 183 bits (202), Expect = 6e-41 Identities = 555/855 (65%), Gaps = 20/855 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| ||||| ||||| |||||| Sbjct 1088809 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGATCTG 1088750 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | ||| |||| || || || | ||||||||| || || Sbjct 1088749 TCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTTCCGACGAGCAGTTCTTCATCTC 1088691 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || ||||| || |||||||| || || || |||||||| || ||| | Sbjct 1088690 CCACATCCTTGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTTGAGCG 1088631 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||||| | | || || ||| | ||||| || |||||||| |||||||| || Sbjct 1088630 ATTCAGCGGCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 1088571 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGA--CGTC 25770 || || | ||||| ||| || | ||| | || ||||| | || | || Sbjct 1088570 GGAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGAGCCTTC 1088511 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | | || | || || || ||||| ||| ||| ||| ||||| | |||||| Sbjct 1088510 TCAGCGA-ACATAC-CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGGCC 1088453 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 ||||| || ||||| | | || | | | |||| |||| || || ||| Sbjct 1088452 GACTGGGCTATCCGATGGATTCAGGACAAGGACTCGTCCTTTGCTCAGCGTCTCGTCGCC 1088393 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 || ||||| || ||||||||||| ||||| ||| | ||||| ||||||||||||||||| Sbjct 1088392 TTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGGCTCAAG 1088333 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||| || ||| ||| ||||||||||||||| | || |||||| Sbjct 1088332 AAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGT 1088273 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT--C 26068 || |||| || ||||||||||| || || | ||| ||| | | | || | Sbjct 1088272 CTTCACACCGACTTTGCCTGCCTCCTTCACTC---TCAC---CTCAAGGGCCGTGCTAGC 1088219 Query 26069 AAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 ||| || | || | ||||||| || || || || ||| ||||||| | Sbjct 1088218 AAGCAGGTCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACT 1088159 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGA 26186 | ||||||||| |||| ||||||| || ||||| || Sbjct 1088158 GAGGCTCTCCCCTGTGCCCTCCTCGGCATGAAC-GCAGACCTCATGAAGCAGTACATCGA 1088100 Query 26187 GTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAA 26246 || || ||||||| ||| ||| | || || || || |||||| | | || Sbjct 1088099 GTTCGTCGCCGACCGTCTCCTGGTCGCCCTCGGCAACGACAAGGTCTACAAGGCCACCAA 1088040 Query 26247 CCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAG 26306 ||| |||||||| ||||| ||||| || | | || ||||| ||||||||||| ||| | Sbjct 1088039 CCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACGAACTTCTTTGAGAAGCG 1087980 Query 26307 GGTCGGCGACTATCA 26321 ||||| ||||| || Sbjct 1087979 TGTCGGTGACTACCA 1087965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841467769280