Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq124 150 5e-31
seq223 120 9e-22
seq257 118 3e-21
seq190 107 6e-18
>seq124
Length=1203342
Score = 150 bits (166), Expect = 5e-31
Identities = 253/358 (71%), Gaps = 6/358 (2%)
Strand=Plus/Minus
Query 133318 CTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAAT 133377
||| || || | ||||| |||||| || ||||| || || || ||| || ||
Sbjct 1088594 CTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCTCTGCTCAT 1088535
Query 133378 TGATACTTACATCAAAGATACCGTC-CAGAAGCACAAAC-TATTCAACGCCATTAGCGAA 133435
||| || |||||||| || || || ||| | ||| || | |||||||||||| | ||
Sbjct 1088534 TGACACCTACATCAAGGAG-CCTTCTCAGC-GAACATACCTCTTCAACGCCATT-GAGAC 1088478
Query 133436 TTTCCT-TGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGC 133494
||| || || ||||| | ||||||||||| |||||| ||||||||| |
Sbjct 1088477 CATCCCCTGCATCCGCAAGAAGGCCGACTGGGCTATCCGATGGATTCAGGACAAGGACTC 1088418
Query 133495 GAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGC 133554
| |||||| |||||||| || || |||| || |||||||| || |||||||||||
Sbjct 1088417 GTCCTTTGCTCAGCGTCTCGTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGC 1088358
Query 133555 GTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAA 133614
|| ||| || || ||||| || ||||||||| | | ||||| ||| || || ||
Sbjct 1088357 CTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAA 1088298
Query 133615 CGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCT 133672
||| || || || | || |||| ||||||||||| |||||| | |||||||||
Sbjct 1088297 CGAGCTCATCTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTCCTTCACTCT 1088240
>seq223
Length=4967455
Score = 120 bits (132), Expect = 9e-22
Identities = 140/188 (74%), Gaps = 1/188 (1%)
Strand=Plus/Minus
Query 251475 GAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGAC 251533
||||| |||| || |||| | |||| ||||||||||||||||||||| | ||| ||||
Sbjct 2316793 GAAGCTGAGAGGCGCCGTAGGCGATCAGACAATCACGCTCCATTTCACCCAGACGCAGAC 2316734
Query 251534 CACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGG 251593
|||| || |||| | ||| |||| ||||||||| || || | || | ||||| |||
Sbjct 2316733 CACCTTCTCGAGAACGACCTTCGGTAGGCTGACGCGTCAGGATGGCCTTGGGACCTCTGG 2316674
Query 251594 AGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653
| || || ||| || | ||||| ||||| |||||||||||| | ||| |||
Sbjct 2316673 ATCGAGAGTGCATCTTGTCTTGAACCATGTGCTTCAGACGCTGGTAGTAGATGGGGCCGT 2316614
Query 251654 TGAAGATG 251661
||||||||
Sbjct 2316613 TGAAGATG 2316606
Score = 114 bits (126), Expect = 4e-20
Identities = 176/251 (70%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652
|| |||||||| ||||| || | || || || || |||||||| ||||| | |||
Sbjct 1923465 CGTCGCTGAATGTAACCTGTCTCGGCAGTCTTGACCGCAGTATCAATGAGACCTTCTCGA 1923406
Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712
||| |||| || |||||||| | ||| || || || | || | ||| ||||
Sbjct 1923405 CCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTAAGGCCACGAAGGTACGAGTTCTCG 1923346
Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772
|||||||| || || |||||||| | || |||||| || || ||||| || | | |
Sbjct 1923345 ACGAAACCTCGGGCTTCGGGCGAGTAATCATCCTTGGTGAAATGGGGCAGTGTTCGATAC 1923286
Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832
| | ||| | || ||||||||||| || ||| ||||||| |||| || | |||||
Sbjct 1923285 TTGAATCCGAAGGGAATACGCTTTCCTTCGACGATCTGCTGACCCACAAGCGCAGTCATC 1923226
Query 302833 TGCGAAATATT 302843
||||| || ||
Sbjct 1923225 TGCGAGATGTT 1923215
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | |||||| |||||| |||| ||||| |||||| | ||||||||
Sbjct 1924263 AGAATTTCCTTGAGACGGGGCACACCAAGGGTAACGTT---CTTGGAAGACACACCAGCG 1924207
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||| || ||||| || | ||||||| ||||||||||| || || || |
Sbjct 1924206 AAATGGAATGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATGGACTGAGCAGCCAAA 1924147
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 1924146 ACACCAACCATTTCACCAGG 1924127
>seq257
Length=3268735
Score = 118 bits (130), Expect = 3e-21
Identities = 588/926 (63%), Gaps = 23/926 (2%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646
||| ||| || || || || || ||| ||| | | | | ||| || | ||| |||
Sbjct 718261 CAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCAGGGGCACAGTACTCGATAATTTCAG 718202
Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706
||| ||||| || || ||||| || | ||||||||||| || | ||| ||
Sbjct 718201 TGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 718142
Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766
||||||||| || ||| | ||| | || ||||| |||| || || || || ||
Sbjct 718141 GATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCATACC 718082
Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTG----TATCTGCCTTCCGACTCATATTTCATA 155822
|||| | |||| || || ||| || | |||||| ||||| ||| |
Sbjct 718081 AGAGCTTCTGGGCCTTCATGGTCTTACGACCCTTACCGGCCTTC----TCATACTTCTCA 718026
Query 155823 TACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAA 155882
||||| | | | ||||||||||| || || || || ||||||| | ||||||
Sbjct 718025 TACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCAC 717966
Query 155883 AACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939
| || | ||| | || || | | |||||| ||| || | ||| |||
Sbjct 717965 ATGAGGGTCCAGTCACCGTTCTTCTCAA---CACGCTTCATGAAGAGATCGGGGATCCAG 717909
Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCT 155999
| ||| ||| ||||| | || |||||| | |||||| ||||| || || ||
Sbjct 717908 AGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCA 717849
Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059
| ||| || | ||| | || ||||| || || || ||||| |||| | |
Sbjct 717848 AGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGC 717789
Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116
||| ||||||||||| || || || ||||| || |||||||||| ||||| || |
Sbjct 717788 TTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTG 717729
Query 156117 ATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATG 156175
| ||| ||||| || || ||||| || ||| || | || |||| | || | | ||
Sbjct 717728 ACACCGTTGGAGGTACCGTTGGTACCAGCG-ATGTAAGAGCCAGTGGCACGGATACGGTG 717670
Query 156176 AATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGTAT 156234
| | || ||||||||||| | |||| || ||||| || || ||| | |||||
Sbjct 717669 CACGTTCAGGCCAATACCACCAG-CCATCTTGGAAATCATGGCACAGGTCTTGAGAGTAT 717611
Query 156235 TGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAG 156294
| ||||| |||||| || || | ||| | || |||| || | || |
Sbjct 717610 CATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGGG 717551
Query 156295 GTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACA 156354
| | || || || || ||||| || || || | |||||| | || |||| | ||||
Sbjct 717550 GCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGAAGAACTTGCTCGACA 717491
Query 156355 TATAATCGTATGTCTCCTTAATCTTCTCAA-GATTAGACCCGTGAATACAGATAGAGACC 156413
| | ||| ||||| | ||||| | | |||| | || | | ||||||
Sbjct 717490 TGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAG-ATGCCAACAGAGACA 717432
Query 156414 CTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCG 156473
| ||| ||| || || |||||||| |||||| |||||||| || ||||| |
Sbjct 717431 CGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGAT 717372
Query 156474 CGTTCCAGAGTTTTAAACCCGAAATA 156499
|| || ||||| || || || || ||
Sbjct 717371 CGCTCAAGAGTCTTGAAGCCAAAGTA 717346
>seq190
Length=2306874
Score = 107 bits (118), Expect = 6e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
||||| ||||| | || || ||||| | | ||||||| || | ||| | || ||
Sbjct 1849265 ATAAGTCCACAGACTTCGCAGACGTGGACTCGGAAAGCATCCGAAACTTCAAACAGACGC 1849324
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
||||| |||| | ||| ||||| | ||||||||||||||| ||||| || |||||
Sbjct 1849325 TCCTTGAGGAAGGCGGCTGCTCCGTGGGCAATCATACAATCACGTTCCATCTCTCCGAAT 1849384
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570
|| ||||||||||| ||||| | ||| ||| | ||||| |||||
Sbjct 1849385 CGCAGACCACCATCTCGAGCACGACCTTCGACGGGCTGTCGAGT 1849428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471812187850719
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |