Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq124 150 5e-31 seq223 120 9e-22 seq257 118 3e-21 seq190 107 6e-18 >seq124 Length=1203342 Score = 150 bits (166), Expect = 5e-31 Identities = 253/358 (71%), Gaps = 6/358 (2%) Strand=Plus/Minus Query 133318 CTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAAT 133377 ||| || || | ||||| |||||| || ||||| || || || ||| || || Sbjct 1088594 CTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCTCTGCTCAT 1088535 Query 133378 TGATACTTACATCAAAGATACCGTC-CAGAAGCACAAAC-TATTCAACGCCATTAGCGAA 133435 ||| || |||||||| || || || ||| | ||| || | |||||||||||| | || Sbjct 1088534 TGACACCTACATCAAGGAG-CCTTCTCAGC-GAACATACCTCTTCAACGCCATT-GAGAC 1088478 Query 133436 TTTCCT-TGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGC 133494 ||| || || ||||| | ||||||||||| |||||| ||||||||| | Sbjct 1088477 CATCCCCTGCATCCGCAAGAAGGCCGACTGGGCTATCCGATGGATTCAGGACAAGGACTC 1088418 Query 133495 GAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGC 133554 | |||||| |||||||| || || |||| || |||||||| || ||||||||||| Sbjct 1088417 GTCCTTTGCTCAGCGTCTCGTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGC 1088358 Query 133555 GTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAA 133614 || ||| || || ||||| || ||||||||| | | ||||| ||| || || || Sbjct 1088357 CTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAA 1088298 Query 133615 CGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCT 133672 ||| || || || | || |||| ||||||||||| |||||| | ||||||||| Sbjct 1088297 CGAGCTCATCTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTCCTTCACTCT 1088240 >seq223 Length=4967455 Score = 120 bits (132), Expect = 9e-22 Identities = 140/188 (74%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 251475 GAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGAC 251533 ||||| |||| || |||| | |||| ||||||||||||||||||||| | ||| |||| Sbjct 2316793 GAAGCTGAGAGGCGCCGTAGGCGATCAGACAATCACGCTCCATTTCACCCAGACGCAGAC 2316734 Query 251534 CACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGG 251593 |||| || |||| | ||| |||| ||||||||| || || | || | ||||| ||| Sbjct 2316733 CACCTTCTCGAGAACGACCTTCGGTAGGCTGACGCGTCAGGATGGCCTTGGGACCTCTGG 2316674 Query 251594 AGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653 | || || ||| || | ||||| ||||| |||||||||||| | ||| ||| Sbjct 2316673 ATCGAGAGTGCATCTTGTCTTGAACCATGTGCTTCAGACGCTGGTAGTAGATGGGGCCGT 2316614 Query 251654 TGAAGATG 251661 |||||||| Sbjct 2316613 TGAAGATG 2316606 Score = 114 bits (126), Expect = 4e-20 Identities = 176/251 (70%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652 || |||||||| ||||| || | || || || || |||||||| ||||| | ||| Sbjct 1923465 CGTCGCTGAATGTAACCTGTCTCGGCAGTCTTGACCGCAGTATCAATGAGACCTTCTCGA 1923406 Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712 ||| |||| || |||||||| | ||| || || || | || | ||| |||| Sbjct 1923405 CCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTAAGGCCACGAAGGTACGAGTTCTCG 1923346 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 |||||||| || || |||||||| | || |||||| || || ||||| || | | | Sbjct 1923345 ACGAAACCTCGGGCTTCGGGCGAGTAATCATCCTTGGTGAAATGGGGCAGTGTTCGATAC 1923286 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832 | | ||| | || ||||||||||| || ||| ||||||| |||| || | ||||| Sbjct 1923285 TTGAATCCGAAGGGAATACGCTTTCCTTCGACGATCTGCTGACCCACAAGCGCAGTCATC 1923226 Query 302833 TGCGAAATATT 302843 ||||| || || Sbjct 1923225 TGCGAGATGTT 1923215 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | |||||| |||||| |||| ||||| |||||| | |||||||| Sbjct 1924263 AGAATTTCCTTGAGACGGGGCACACCAAGGGTAACGTT---CTTGGAAGACACACCAGCG 1924207 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| || ||||| || | ||||||| ||||||||||| || || || | Sbjct 1924206 AAATGGAATGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATGGACTGAGCAGCCAAA 1924147 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 1924146 ACACCAACCATTTCACCAGG 1924127 >seq257 Length=3268735 Score = 118 bits (130), Expect = 3e-21 Identities = 588/926 (63%), Gaps = 23/926 (2%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||| ||| || || || || || ||| ||| | | | | ||| || | ||| ||| Sbjct 718261 CAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCAGGGGCACAGTACTCGATAATTTCAG 718202 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 ||| ||||| || || ||||| || | ||||||||||| || | ||| || Sbjct 718201 TGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 718142 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 ||||||||| || ||| | ||| | || ||||| |||| || || || || || Sbjct 718141 GATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCATACC 718082 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTG----TATCTGCCTTCCGACTCATATTTCATA 155822 |||| | |||| || || ||| || | |||||| ||||| ||| | Sbjct 718081 AGAGCTTCTGGGCCTTCATGGTCTTACGACCCTTACCGGCCTTC----TCATACTTCTCA 718026 Query 155823 TACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAA 155882 ||||| | | | ||||||||||| || || || || ||||||| | |||||| Sbjct 718025 TACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCAC 717966 Query 155883 AACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939 | || | ||| | || || | | |||||| ||| || | ||| ||| Sbjct 717965 ATGAGGGTCCAGTCACCGTTCTTCTCAA---CACGCTTCATGAAGAGATCGGGGATCCAG 717909 Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCT 155999 | ||| ||| ||||| | || |||||| | |||||| ||||| || || || Sbjct 717908 AGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCA 717849 Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059 | ||| || | ||| | || ||||| || || || ||||| |||| | | Sbjct 717848 AGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGC 717789 Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116 ||| ||||||||||| || || || ||||| || |||||||||| ||||| || | Sbjct 717788 TTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTG 717729 Query 156117 ATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATG 156175 | ||| ||||| || || ||||| || ||| || | || |||| | || | | || Sbjct 717728 ACACCGTTGGAGGTACCGTTGGTACCAGCG-ATGTAAGAGCCAGTGGCACGGATACGGTG 717670 Query 156176 AATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGTAT 156234 | | || ||||||||||| | |||| || ||||| || || ||| | ||||| Sbjct 717669 CACGTTCAGGCCAATACCACCAG-CCATCTTGGAAATCATGGCACAGGTCTTGAGAGTAT 717611 Query 156235 TGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAG 156294 | ||||| |||||| || || | ||| | || |||| || | || | Sbjct 717610 CATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGGG 717551 Query 156295 GTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACA 156354 | | || || || || ||||| || || || | |||||| | || |||| | |||| Sbjct 717550 GCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGAAGAACTTGCTCGACA 717491 Query 156355 TATAATCGTATGTCTCCTTAATCTTCTCAA-GATTAGACCCGTGAATACAGATAGAGACC 156413 | | ||| ||||| | ||||| | | |||| | || | | |||||| Sbjct 717490 TGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAG-ATGCCAACAGAGACA 717432 Query 156414 CTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCG 156473 | ||| ||| || || |||||||| |||||| |||||||| || ||||| | Sbjct 717431 CGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGAT 717372 Query 156474 CGTTCCAGAGTTTTAAACCCGAAATA 156499 || || ||||| || || || || || Sbjct 717371 CGCTCAAGAGTCTTGAAGCCAAAGTA 717346 >seq190 Length=2306874 Score = 107 bits (118), Expect = 6e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 ||||| ||||| | || || ||||| | | ||||||| || | ||| | || || Sbjct 1849265 ATAAGTCCACAGACTTCGCAGACGTGGACTCGGAAAGCATCCGAAACTTCAAACAGACGC 1849324 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 ||||| |||| | ||| ||||| | ||||||||||||||| ||||| || ||||| Sbjct 1849325 TCCTTGAGGAAGGCGGCTGCTCCGTGGGCAATCATACAATCACGTTCCATCTCTCCGAAT 1849384 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 || ||||||||||| ||||| | ||| ||| | ||||| ||||| Sbjct 1849385 CGCAGACCACCATCTCGAGCACGACCTTCGACGGGCTGTCGAGT 1849428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471812187850719