Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq90 149 8e-30 seq257 147 3e-29 seq124 123 3e-22 seq248 91.5 2e-12 >seq90 Length=1447030 Score = 149 bits (164), Expect = 8e-30 Identities = 255/369 (69%), Gaps = 6/369 (2%) Strand=Plus/Minus Query 18127 TGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAG 18186 |||||||||||| | || || ||| | || ||||| ||||||||||||| ||| Sbjct 453694 TGCATCATCGACAACTGCCCACCCAACATTGCCCTCACCGAGTCCGACATCCAGCCCCAG 453635 Query 18187 TTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGC 18246 | | || ||||| ||||||||| || | | ||||| ||||||||| |||||| Sbjct 453634 CTCAACCGTCGCCGTCCGGGCCAGTCGGCCATCACGACGCCCCGCAACGAGAAGGATCGC 453575 Query 18247 GTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTT 18306 |||| |||||| |||||||| ||||||||| |||| ||||| | || | ||| Sbjct 453574 GTCACCATCCACTCGGGCACCGAGAACGGCGTCACCCTCGGTACTCCGATTTTGCTCACC 453515 Query 18307 GTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATG---TGCAAGGTG---CCG 18360 || ||||| |||||||||||| ||||| |||| | | | || || Sbjct 453514 GTCCCCAACGAGGACCAGCGGCCCAAGGACTACGGAGACAAGACTATCGACCTGTACCCC 453455 Query 18361 CGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGC 18420 || || ||||| |||| || ||| ||| ||||| ||| ||||||| || || ||| Sbjct 453454 CGACCTAGTCACGCTGACTGGACATACCTGGAGAAGTATGGCGTCAAGGCTTCTTCTGGC 453395 Query 18421 GGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAG 18480 || || || ||||| || |||||| | || ||||| || || || || || ||| Sbjct 453394 GGTGGACGCAGCTCTGCTCGTGAGACCATTGCCCGAGTCGCTGCTGGTGCTGTAGCTGAG 453335 Query 18481 AAATGGCTC 18489 || |||||| Sbjct 453334 AAGTGGCTC 453326 >seq257 Length=3268735 Score = 147 bits (162), Expect = 3e-29 Identities = 98/109 (90%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| |||||||||||||||||||||| || || ||| |||| |||||| |||| |||||| Sbjct 2029440 GCCTCCAACTACCTCGACATCAAGCCCCTCCTTGATGTTGGCTGCAAGACTGTCGCCAAC 2029381 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||||| |||||||||||||||||||| || ||||||| Sbjct 2029380 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACATTCAACATCA 2029332 >seq124 Length=1203342 Score = 123 bits (136), Expect = 3e-22 Identities = 178/250 (71%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || ||||| |||||||| | || ||||| Sbjct 1087959 GCCTTCTGGTAGTCACCGACACGCTTCTCAAAGAAGTTCGTCTTGCCACCAAGGGAGATG 1088018 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| ||| ||||| | | Sbjct 1088019 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTGTCGTTGCCGAGGGCGACC 1088078 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || ||||||||||| |||||||||||||| ||||||| | ||||||||||||| | Sbjct 1088079 AGGAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCTGCGTTCATGCCGAGG 1088138 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | ||| ||| ||||| | ||| || |||||| || |||| Sbjct 1088139 AGGGCACAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATG 1088198 Query 868931 ATCTGCCTGG 868940 || | ||||| Sbjct 1088199 ATGT-CCTGG 1088207 Score = 122 bits (134), Expect = 1e-21 Identities = 207/294 (70%), Gaps = 21/294 (7%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||| | |||||| |||| || || |||||||| || ||||| Sbjct 1088273 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTT 1088332 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGA--GAAAAAGATGCCCTCGACGGCGGCA 869296 ||||||||| ||||||| | | || || | | ||| ||||||||||||||||| || Sbjct 1088333 CTTGAGCCAGAAGATGGAG--GCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCG 1088390 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT--TG-ATCCACTTCATC 869353 ||| ||| ||| |||| |||||| | |||| ||||||| || ||||| || Sbjct 1088391 AAGGCGACGAGACGCTGAGCAAAG--GACGAG----TCCTTGTCCTGAATCCATCGGATA 1088444 Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 869413 |||||||||||||| || | | | || | || || |||||| ||||||| Sbjct 1088445 GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGT----A 1088500 Query 869414 TTTTCG----GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | |||| | || ||||||| |||||||| || || || || |||||||| Sbjct 1088501 TGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTC 1088554 >seq248 Length=2291965 Score = 91.5 bits (100), Expect = 2e-12 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 1574067 GGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAG 1574126 || ||||||||| || ||||||||||||| || ||| | | || |||| ||||| || Sbjct 486797 GGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACAGTATGACCTCGGGCGCCCAACAA 486738 Query 1574127 GCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAAC 1574186 || || || || ||||||| || |||||||||| || |||||| | || |||||| Sbjct 486737 GCACTCCGACGAACTATGGAAATTTACTCCAACACGACTCGATTTGCCTTTGCCTGCAAC 486678 Query 1574187 ACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCG 1574236 ||| | ||||||| |||| ||| || ||||| || ||||| Sbjct 486677 CAGTCCAACAAAATCATCGAACCCCTACAATCACGATGCGCGATCCTGCG 486628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107115647435979