Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq90 149 8e-30
seq257 147 3e-29
seq124 123 3e-22
seq248 91.5 2e-12
>seq90
Length=1447030
Score = 149 bits (164), Expect = 8e-30
Identities = 255/369 (69%), Gaps = 6/369 (2%)
Strand=Plus/Minus
Query 18127 TGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAG 18186
|||||||||||| | || || ||| | || ||||| ||||||||||||| |||
Sbjct 453694 TGCATCATCGACAACTGCCCACCCAACATTGCCCTCACCGAGTCCGACATCCAGCCCCAG 453635
Query 18187 TTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGC 18246
| | || ||||| ||||||||| || | | ||||| ||||||||| ||||||
Sbjct 453634 CTCAACCGTCGCCGTCCGGGCCAGTCGGCCATCACGACGCCCCGCAACGAGAAGGATCGC 453575
Query 18247 GTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTT 18306
|||| |||||| |||||||| ||||||||| |||| ||||| | || | |||
Sbjct 453574 GTCACCATCCACTCGGGCACCGAGAACGGCGTCACCCTCGGTACTCCGATTTTGCTCACC 453515
Query 18307 GTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATG---TGCAAGGTG---CCG 18360
|| ||||| |||||||||||| ||||| |||| | | | || ||
Sbjct 453514 GTCCCCAACGAGGACCAGCGGCCCAAGGACTACGGAGACAAGACTATCGACCTGTACCCC 453455
Query 18361 CGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGC 18420
|| || ||||| |||| || ||| ||| ||||| ||| ||||||| || || |||
Sbjct 453454 CGACCTAGTCACGCTGACTGGACATACCTGGAGAAGTATGGCGTCAAGGCTTCTTCTGGC 453395
Query 18421 GGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAG 18480
|| || || ||||| || |||||| | || ||||| || || || || || |||
Sbjct 453394 GGTGGACGCAGCTCTGCTCGTGAGACCATTGCCCGAGTCGCTGCTGGTGCTGTAGCTGAG 453335
Query 18481 AAATGGCTC 18489
|| ||||||
Sbjct 453334 AAGTGGCTC 453326
>seq257
Length=3268735
Score = 147 bits (162), Expect = 3e-29
Identities = 98/109 (90%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| |||||||||||||||||||||| || || ||| |||| |||||| |||| ||||||
Sbjct 2029440 GCCTCCAACTACCTCGACATCAAGCCCCTCCTTGATGTTGGCTGCAAGACTGTCGCCAAC 2029381
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||||||||| |||||||||||||||||||| || |||||||
Sbjct 2029380 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACATTCAACATCA 2029332
>seq124
Length=1203342
Score = 123 bits (136), Expect = 3e-22
Identities = 178/250 (71%), Gaps = 1/250 (0%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| ||| || ||||| |||||||| | || |||||
Sbjct 1087959 GCCTTCTGGTAGTCACCGACACGCTTCTCAAAGAAGTTCGTCTTGCCACCAAGGGAGATG 1088018
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||||||| ||| ||| ||||| | |
Sbjct 1088019 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTGTCGTTGCCGAGGGCGACC 1088078
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || ||||||||||| |||||||||||||| ||||||| | ||||||||||||| |
Sbjct 1088079 AGGAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCTGCGTTCATGCCGAGG 1088138
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | ||| ||| ||||| | ||| || |||||| || ||||
Sbjct 1088139 AGGGCACAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATG 1088198
Query 868931 ATCTGCCTGG 868940
|| | |||||
Sbjct 1088199 ATGT-CCTGG 1088207
Score = 122 bits (134), Expect = 1e-21
Identities = 207/294 (70%), Gaps = 21/294 (7%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || || ||| ||| | |||||| |||| || || |||||||| || |||||
Sbjct 1088273 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTT 1088332
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGA--GAAAAAGATGCCCTCGACGGCGGCA 869296
||||||||| ||||||| | | || || | | ||| ||||||||||||||||| ||
Sbjct 1088333 CTTGAGCCAGAAGATGGAG--GCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCG 1088390
Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT--TG-ATCCACTTCATC 869353
||| ||| ||| |||| |||||| | |||| ||||||| || ||||| ||
Sbjct 1088391 AAGGCGACGAGACGCTGAGCAAAG--GACGAG----TCCTTGTCCTGAATCCATCGGATA 1088444
Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 869413
|||||||||||||| || | | | || | || || |||||| |||||||
Sbjct 1088445 GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGT----A 1088500
Query 869414 TTTTCG----GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
| |||| | || ||||||| |||||||| || || || || ||||||||
Sbjct 1088501 TGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTC 1088554
>seq248
Length=2291965
Score = 91.5 bits (100), Expect = 2e-12
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 1574067 GGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAG 1574126
|| ||||||||| || ||||||||||||| || ||| | | || |||| ||||| ||
Sbjct 486797 GGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACAGTATGACCTCGGGCGCCCAACAA 486738
Query 1574127 GCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAAC 1574186
|| || || || ||||||| || |||||||||| || |||||| | || ||||||
Sbjct 486737 GCACTCCGACGAACTATGGAAATTTACTCCAACACGACTCGATTTGCCTTTGCCTGCAAC 486678
Query 1574187 ACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCG 1574236
||| | ||||||| |||| ||| || ||||| || |||||
Sbjct 486677 CAGTCCAACAAAATCATCGAACCCCTACAATCACGATGCGCGATCCTGCG 486628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107115647435979
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |