Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq124 150 3e-30
seq257 138 2e-26
seq248 107 3e-17
>seq124
Length=1203342
Score = 150 bits (166), Expect = 3e-30
Identities = 238/333 (71%), Gaps = 15/333 (5%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| || || ||| ||| | |||||| ||| || || |||||||| || |||||
Sbjct 1088273 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTT 1088332
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGA--GAAAAAGATGCCCTCGACGGCGGCA 794457
||||||||| ||||||| | || || | | ||| ||||||||||||||||| ||
Sbjct 1088333 CTTGAGCCAGAAGATGGAG--GCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCG 1088390
Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT--TGA-TCCACTTCATC 794514
||| ||||||| |||| ||||| | | || || |||| ||| |||| ||
Sbjct 1088391 AAGGCGACGAGACGCTGAGCAAAGGA--CGAGTCC----TTGTCCTGAATCCATCGGATA 1088444
Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTC 794573
||||| || ||||| || | | |||| | || || |||||| ||||||| ||
Sbjct 1088445 GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTATGTT 1088504
Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633
| || || ||||||| ||||||||| ||||| || ||||||||||| ||||||||
Sbjct 1088505 CGCTGAGAA-GGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGAT 1088563
Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
||| || || |||||||||||| || |||||
Sbjct 1088564 GTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 1088596
Score = 113 bits (124), Expect = 7e-19
Identities = 180/257 (70%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||| || || || || ||| ||| || ||||| |||||||| | ||
Sbjct 1087952 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCAAAGAAGTTCGTCTTGCCACCAAG 1088011
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011
||||| |||||| | ||| ||||||| | | |||| ||| ||| |||||
Sbjct 1088012 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTGTCGTTGCCGAG 1088071
Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071
| | || || |||||||||||||| || |||||||| ||||||| | ||||||||
Sbjct 1088072 GGCGACCAGGAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCTGCGTTCAT 1088131
Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131
||||| ||| || ||| || | ||| | | ||||| | ||| || |||||| ||
Sbjct 1088132 GCCGAGGAGGGCACAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATC 1088191
Query 794132 GATGATGATCTGCCTGG 794148
||||||| | |||||
Sbjct 1088192 AGTGATGATGT-CCTGG 1088207
>seq257
Length=3268735
Score = 138 bits (152), Expect = 2e-26
Identities = 96/109 (88%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| |||||||||||||||||||||||||||| ||| | || |||||||| || ||||||
Sbjct 2029440 GCCTCCAACTACCTCGACATCAAGCCCCTCCTTGATGTTGGCTGCAAGACTGTCGCCAAC 2029381
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| |||||||| ||||||||||| || |||||||
Sbjct 2029380 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACATTCAACATCA 2029332
Score = 107 bits (118), Expect = 3e-17
Identities = 79/92 (86%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| ||||| |||||| |||| || || ||| | |
Sbjct 9118 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACAGCGTGCTTGGCAAGCTCACCGGGGAG 9059
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||||||||| || | |||||||||||| ||||
Sbjct 9058 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 9027
Score = 89.7 bits (98), Expect = 8e-12
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 2071786 CCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCA 2071845
|||| ||| ||| || ||||| |||| ||||| | ||| | |||||| |||
Sbjct 718004 CCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTC 717945
Query 2071846 GTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCC 2071905
|| | || || ||| || || ||| |||| || | || || ||||| ||
Sbjct 717944 TTCTCAACACGCTTCATGAAGAGATCGGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCG 717885
Query 2071906 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGC 2071965
||| ||||||||||||||||||||| |||||| || | || | || || ||||||
Sbjct 717884 CGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGC 717825
Query 2071966 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|| ||||| |||||| ||||||||| || |||||| ||| ||
Sbjct 717824 CAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACC 717778
>seq248
Length=2291965
Score = 107 bits (118), Expect = 3e-17
Identities = 166/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263
|||||||||||| || |||||||||| || || ||| | | || |||| ||||| ||
Sbjct 486797 GGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACAGTATGACCTCGGGCGCCCAACAA 486738
Query 2019264 GCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323
|| |||||| || ||||||| ||| |||||||||| || ||||| | |||||||||
Sbjct 486737 GCACTCCGACGAACTATGGAAATTTACTCCAACACGACTCGATTTGCCTTTGCCTGCAAC 486678
Query 2019324 ACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGC 2019383
||| | |||||||| |||| || || ||||| ||| |||| | ||
Sbjct 486677 CAGTCCAACAAAATCATCGAACCCCTACAATCACGATGCGCGATCCTGCGATACGCCAAG 486618
Query 2019384 CTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440
| || || || ||| ||| || ||| | |||||||| || |||||||||
Sbjct 486617 TTGACGGATGCTCAGGTCGTGAAACGACTGATGCAAATTATCGAGGCGGAAAAGGTC 486561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916215870500993
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |