Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq124 150 3e-30 seq257 138 2e-26 seq248 107 3e-17 >seq124 Length=1203342 Score = 150 bits (166), Expect = 3e-30 Identities = 238/333 (71%), Gaps = 15/333 (5%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| ||| | |||||| ||| || || |||||||| || ||||| Sbjct 1088273 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTT 1088332 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGA--GAAAAAGATGCCCTCGACGGCGGCA 794457 ||||||||| ||||||| | || || | | ||| ||||||||||||||||| || Sbjct 1088333 CTTGAGCCAGAAGATGGAG--GCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCG 1088390 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT--TGA-TCCACTTCATC 794514 ||| ||||||| |||| ||||| | | || || |||| ||| |||| || Sbjct 1088391 AAGGCGACGAGACGCTGAGCAAAGGA--CGAGTCC----TTGTCCTGAATCCATCGGATA 1088444 Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTC 794573 ||||| || ||||| || | | |||| | || || |||||| ||||||| || Sbjct 1088445 GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTATGTT 1088504 Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633 | || || ||||||| ||||||||| ||||| || ||||||||||| |||||||| Sbjct 1088505 CGCTGAGAA-GGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGAT 1088563 Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||| || || |||||||||||| || ||||| Sbjct 1088564 GTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 1088596 Score = 113 bits (124), Expect = 7e-19 Identities = 180/257 (70%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||| || || || || ||| ||| || ||||| |||||||| | || Sbjct 1087952 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCAAAGAAGTTCGTCTTGCCACCAAG 1088011 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||||| |||||| | ||| ||||||| | | |||| ||| ||| ||||| Sbjct 1088012 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTGTCGTTGCCGAG 1088071 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 | | || || |||||||||||||| || |||||||| ||||||| | |||||||| Sbjct 1088072 GGCGACCAGGAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCTGCGTTCAT 1088131 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 ||||| ||| || ||| || | ||| | | ||||| | ||| || |||||| || Sbjct 1088132 GCCGAGGAGGGCACAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATC 1088191 Query 794132 GATGATGATCTGCCTGG 794148 ||||||| | ||||| Sbjct 1088192 AGTGATGATGT-CCTGG 1088207 >seq257 Length=3268735 Score = 138 bits (152), Expect = 2e-26 Identities = 96/109 (88%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| |||||||||||||||||||||||||||| ||| | || |||||||| || |||||| Sbjct 2029440 GCCTCCAACTACCTCGACATCAAGCCCCTCCTTGATGTTGGCTGCAAGACTGTCGCCAAC 2029381 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||||||||| |||||||| ||||||||||| || ||||||| Sbjct 2029380 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACATTCAACATCA 2029332 Score = 107 bits (118), Expect = 3e-17 Identities = 79/92 (86%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||||||||| ||||| |||||| |||| || || ||| | | Sbjct 9118 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACAGCGTGCTTGGCAAGCTCACCGGGGAG 9059 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||||||| || | |||||||||||| |||| Sbjct 9058 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 9027 Score = 89.7 bits (98), Expect = 8e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 2071786 CCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCA 2071845 |||| ||| ||| || ||||| |||| ||||| | ||| | |||||| ||| Sbjct 718004 CCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTC 717945 Query 2071846 GTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCC 2071905 || | || || ||| || || ||| |||| || | || || ||||| || Sbjct 717944 TTCTCAACACGCTTCATGAAGAGATCGGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCG 717885 Query 2071906 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGC 2071965 ||| ||||||||||||||||||||| |||||| || | || | || || |||||| Sbjct 717884 CGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGC 717825 Query 2071966 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || ||||| |||||| ||||||||| || |||||| ||| || Sbjct 717824 CAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACC 717778 >seq248 Length=2291965 Score = 107 bits (118), Expect = 3e-17 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263 |||||||||||| || |||||||||| || || ||| | | || |||| ||||| || Sbjct 486797 GGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACAGTATGACCTCGGGCGCCCAACAA 486738 Query 2019264 GCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323 || |||||| || ||||||| ||| |||||||||| || ||||| | ||||||||| Sbjct 486737 GCACTCCGACGAACTATGGAAATTTACTCCAACACGACTCGATTTGCCTTTGCCTGCAAC 486678 Query 2019324 ACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGC 2019383 ||| | |||||||| |||| || || ||||| ||| |||| | || Sbjct 486677 CAGTCCAACAAAATCATCGAACCCCTACAATCACGATGCGCGATCCTGCGATACGCCAAG 486618 Query 2019384 CTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 | || || || ||| ||| || ||| | |||||||| || ||||||||| Sbjct 486617 TTGACGGATGCTCAGGTCGTGAAACGACTGATGCAAATTATCGAGGCGGAAAAGGTC 486561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916215870500993