Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq57 134 9e-27 seq101 122 6e-23 seq179 96.9 2e-15 >seq57 Length=3318891 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||||||||| ||||| || | | |||| | || Sbjct 1505407 AGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCT 1505348 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || |||||||| ||||| |||||||| | || | ||||||||||| Sbjct 1505347 TCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 1505288 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | || | || ||| |||||| || | || |||||| Sbjct 1505287 TGAATCTTGGACTTCACATTGTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTC 1505228 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| ||||| |||||||||||||| Sbjct 1505227 TTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| |||| ||||||||||||||| ||||| | ||| | || |||| Sbjct 1504951 AGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCC 1504892 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| || |||||||| || ||||| || | || | ||||||||||| Sbjct 1504891 TCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 1504832 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | ||| || || | ||| || ||| Sbjct 1504831 TGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 1504772 Query 34946 TTTCCCGTGAGGGTCTTTAC 34965 || || || |||||||| || Sbjct 1504771 TTGCCGGTCAGGGTCTTGAC 1504752 Score = 96.9 bits (106), Expect = 2e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||| ||||| || || || ||| |||| |||| Sbjct 1504675 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 1504616 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| || |||||||| || ||||| || | || | ||||||||||| Sbjct 1504615 TCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 1504556 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || ||| || || | ||| |||||| Sbjct 1504555 TGAATCTTCGACTTAACGTTGTCGATGGTATCCGAGGACTCAACCTCGAGGGTGATGGTC 1504496 Query 34946 TTTCCCGT 34953 || ||||| Sbjct 1504495 TTGCCCGT 1504488 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || | || | || || |||||||| ||||||||| Sbjct 1505158 TCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 1505099 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || ||||| || || || | || | || ||||| || | || || || ||| Sbjct 1505098 ATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGGATCTTCGACTTCACGT-- 1505041 Query 34907 GCTATCGATTC-ATTGGCC---TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 ||||||| || || | || || |||| ||| ||||||||||| ||||| ||||| Sbjct 1505040 --TATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTT 1504983 Query 34963 TACAAAGATCTGCAT 34977 || ||||| ||||| Sbjct 1504982 GACGAAGATTTGCAT 1504968 >seq101 Length=1115905 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| ||||| ||| |||| |||| Sbjct 940064 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 940005 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| || || |||||||| | || | ||||||||||| Sbjct 940004 TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 939945 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || |||| ||| || ||| Sbjct 939944 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 939885 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 939884 TTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853 >seq179 Length=1234945 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || || | || |||| || || ||||| || ||||||| Sbjct 140964 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 140905 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||||||| ||||| || | || | ||||||||||| | || || ||||| Sbjct 140904 TCAGTCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 140845 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || || |||||| || | ||| |||||||| ||||| |||||||| || | Sbjct 140844 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 140785 Query 34968 A 34968 | Sbjct 140784 A 140784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691660787653