Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq223 87.8 1e-11 >seq223 Length=4967455 Score = 87.8 bits (96), Expect = 1e-11 Identities = 189/283 (67%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || || ||||| ||||| ||||| | ||| | || | || | | || Sbjct 2329876 ACCAGACGGTTGTCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTCGACTTAACC 2329935 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || || |||| | || |||| |||||| ||| |||||||| | ||| Sbjct 2329936 TCGAAGATACCCTCCTCAATGGTCAGGAGAGAAACATCGAAGGTACCACCACCGAGATCG 2329995 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || || || || || || || || ||||| || || | || || Sbjct 2329996 AAGATGAGGACGTTGCGCTCACCCTCGATCTTCTTGTCGAGACCGTAGGCGATGGCGGCG 2330055 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||| || || || || |||| | ||| || ||||||||||| || ||||| || Sbjct 2330056 GCAGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCAGCAATAAGACCGGCATCCTTG 2330115 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 || || || | || || ||||| || || ||||| || |||| Sbjct 2330116 GTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACGGTAA 2330158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740616309512862