Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq57 104 6e-17 >seq57 Length=3318891 Score = 104 bits (114), Expect = 6e-17 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG-- 206230 ||||| ||| ||| || ||||| ||||| || |||||| |||| || || || | | Sbjct 1505199 CAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGA--GTCCAGCG 1505256 Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 | || | || || ||| |||||||| || || || || ||| || ||| | Sbjct 1505257 ATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAGC 1505316 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | ||||||||||||| || |||||| ||||||| || | || ||| | || |||||| Sbjct 1505317 AGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAACA 1505376 Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGT 206378 | ||||| ||||| || ||||||||||| Sbjct 1505377 TTCAGAAGGAGTCGACCCTTCACCTTGT 1505404 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| ||||| || ||||| | || |||||| || || || |||| Sbjct 1504982 CAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCCGATACCATCGATAA 1505041 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || ||||| ||| || || || |||||||||| Sbjct 1505042 CGTGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCAACAGCGACTTATCTT 1505101 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| ||||| | || || || | ||| | ||| |||||| ||||||| || || Sbjct 1505102 CGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACAACATCCAGAAGGAATC 1505161 Query 206364 TACTCTTCACCTTGTT 206379 ||||| ||||||||| Sbjct 1505162 AACTCTGCACCTTGTT 1505177 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||| ||||| | || ||||||| ||| || | || |||||| Sbjct 1505404 ACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCTTCC 1505345 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| || || || Sbjct 1505344 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTG 1505313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181816454223327