Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq57 104 6e-17
>seq57
Length=3318891
Score = 104 bits (114), Expect = 6e-17
Identities = 149/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG-- 206230
||||| ||| ||| || ||||| ||||| || |||||| |||| || || || | |
Sbjct 1505199 CAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGA--GTCCAGCG 1505256
Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290
| || | || || ||| |||||||| || || || || ||| || ||| |
Sbjct 1505257 ATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAGC 1505316
Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350
| ||||||||||||| || |||||| ||||||| || | || ||| | || ||||||
Sbjct 1505317 AGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAACA 1505376
Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGT 206378
| ||||| ||||| || |||||||||||
Sbjct 1505377 TTCAGAAGGAGTCGACCCTTCACCTTGT 1505404
Score = 93.3 bits (102), Expect = 1e-13
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| ||||| || ||||| | || |||||| || || || ||||
Sbjct 1504982 CAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCCGATACCATCGATAA 1505041
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || || ||||| ||| || || || ||||||||||
Sbjct 1505042 CGTGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCAACAGCGACTTATCTT 1505101
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| ||||| | || || || | ||| | ||| |||||| ||||||| || ||
Sbjct 1505102 CGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACAACATCCAGAAGGAATC 1505161
Query 206364 TACTCTTCACCTTGTT 206379
||||| |||||||||
Sbjct 1505162 AACTCTGCACCTTGTT 1505177
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
||||||||||| || ||||| ||||| | || ||||||| ||| || | || ||||||
Sbjct 1505404 ACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCTTCC 1505345
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||| || ||||||||||| || || ||
Sbjct 1505344 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTG 1505313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181816454223327
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |