Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq101 86.0 6e-12
seq57 84.2 2e-11
>seq101
Length=1115905
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||| | |||| || | | | ||||| || || |||||||||||||||| |||
Sbjct 940074 ACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 940015
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| |||||||| || || | | |||| || ||||| || || || || |||||
Sbjct 940014 GCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCC 939955
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || || || || | | || | || |||| | |||||| || |
Sbjct 939954 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 939895
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||| || || || || || || | ||| ||||||||
Sbjct 939894 GGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853
>seq57
Length=3318891
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987
|||| || || || |||||||||||||| | || || || ||||| || || ||||
Sbjct 1505163 TTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGG 1505104
Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047
|||| || ||||||||||| ||||| || ||||| ||||| || || ||||
Sbjct 1505103 CGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGGATCTTCGACTTCA 1505044
Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107
| || | ||||||| || ||||| || | || | || || ||||| || || |
Sbjct 1505043 CGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGTGTCT 1504984
Query 132108 TTATGAAAATCTGCAT 132123
| | ||| || |||||
Sbjct 1504983 TGACGAAGATTTGCAT 1504968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476609490157320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |