Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq101 86.0 6e-12 seq57 84.2 2e-11 >seq101 Length=1115905 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||| | |||| || | | | ||||| || || |||||||||||||||| ||| Sbjct 940074 ACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 940015 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| |||||||| || || | | |||| || ||||| || || || || ||||| Sbjct 940014 GCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCC 939955 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || || | | || | || |||| | |||||| || | Sbjct 939954 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 939895 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| || || || || || || | ||| |||||||| Sbjct 939894 GGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853 >seq57 Length=3318891 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||| || || || |||||||||||||| | || || || ||||| || || |||| Sbjct 1505163 TTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGG 1505104 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct 1505103 CGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGGATCTTCGACTTCA 1505044 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | ||||||| || ||||| || | || | || || ||||| || || | Sbjct 1505043 CGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGTGTCT 1504984 Query 132108 TTATGAAAATCTGCAT 132123 | | ||| || ||||| Sbjct 1504983 TGACGAAGATTTGCAT 1504968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609490157320