Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq223 109 6e-19 >seq223 Length=4967455 Score = 109 bits (120), Expect = 6e-19 Identities = 424/660 (64%), Gaps = 55/660 (8%) Strand=Plus/Minus Query 146891 GTCG-GGGGTTCCTGG-CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTG 146948 |||| ||||||| | |||| || | || |||| || || |||| || |||||||| Sbjct 3761860 GTCGCGGGGTTCACGCTCCAGTTGCGTGTTGAGGGCATCGACATGGTCAAGATAGACGTG 3761801 Query 146949 CGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCAT 147008 |||||| |||| | ||| || | || || | || ||||| |||| ||| Sbjct 3761800 CGCGTCGCCCATGACGTGAGTAAGGCTGCCAGGTACCAATTCGCAGACGTGCGCCATCAT 3761741 Query 147009 GTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGA 147068 || || | || | |||||| || |||||||| ||||| || || |||||||| | || Sbjct 3761740 GTGTGTCAACAATGCGTAGCTAGCAATGTTGAACGGGACACCAAGACCCATGTCGCAGGA 3761681 Query 147069 CCTCTGGTACAGCTGGCACGAGAGCT--CCC-------------------CGTCGGCC-- 147105 | |||||| |||||||| || | ||| ||||| || Sbjct 3761680 TCGCTGGTAGAGCTGGCAGTGTAGATGACCCTGGGGCTTGGTCTCAGGGTCGTCGTCCTT 3761621 Query 147106 ----------------ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 ||||| || ||| | |||||||| || || || |||| Sbjct 3761620 TCGTCGGGGATAGGAGACGTAGAATTGGGCAAACATGTGGCAAGGTGGGAGGACCATCTT 3761561 Query 147150 GGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCT 147208 ||| || |||||||||||||| || | | ||| || | | || | ||||| | Sbjct 3761560 CTTCAGATCGGCGGGGTTCCAGGCGGAAAGGATCAGACGAC-GATCGTATGGGTTGGTGC 3761502 Query 147209 TAATCTCTTCGATAACC-CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCG 147267 | || | |||| | || | |||||||| || ||||||||| ||||| ||| | Sbjct 3761501 GCAGCTTGTGAATAATCTCAGCA-AGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTG 3761443 Query 147268 CAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCG 147327 ||| || ||| ||| |||||||||| |||||||||||||||||| || || || ||| Sbjct 3761442 GCGTCGACATACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTACACGGGGCCGAGATCG 3761383 Query 147328 CCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTT---GAGAAACTCGGGGGACCCGTGGGCG 147384 ||| || | || | || ||| | || ||| |||||| |||| |||| | || Sbjct 3761382 CCGACCTCGCGATG-GTTGAGACCG--AGATTGTCGAGGAACTCGCGGGAGCCGTTGCCG 3761326 Query 147385 TCCCAGATGCCCACTCC--CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 |||||||| | || | | || ||| ||| | ||| ||| |||| ||||| Sbjct 3761325 TCCCAGATCTTGATACCAGCCTCGCTGAG-GCT-GGTGGAGGATGTGTTGCCCTCGATGA 3761268 Query 147443 ACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 ||||||| ||||| | | ||| | | ||||| | ||||||||| || ||||||| Sbjct 3761267 ACCAGAGGAGCTCGGCGATAACGGCGCGGGTGAAGACGCGCTTGGTGGTGAGGAGGGGGA 3761208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485906736800