Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq223 109 6e-19
>seq223
Length=4967455
Score = 109 bits (120), Expect = 6e-19
Identities = 424/660 (64%), Gaps = 55/660 (8%)
Strand=Plus/Minus
Query 146891 GTCG-GGGGTTCCTGG-CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTG 146948
|||| ||||||| | |||| || | || |||| || || |||| || ||||||||
Sbjct 3761860 GTCGCGGGGTTCACGCTCCAGTTGCGTGTTGAGGGCATCGACATGGTCAAGATAGACGTG 3761801
Query 146949 CGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCAT 147008
|||||| |||| | ||| || | || || | || ||||| |||| |||
Sbjct 3761800 CGCGTCGCCCATGACGTGAGTAAGGCTGCCAGGTACCAATTCGCAGACGTGCGCCATCAT 3761741
Query 147009 GTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGA 147068
|| || | || | |||||| || |||||||| ||||| || || |||||||| | ||
Sbjct 3761740 GTGTGTCAACAATGCGTAGCTAGCAATGTTGAACGGGACACCAAGACCCATGTCGCAGGA 3761681
Query 147069 CCTCTGGTACAGCTGGCACGAGAGCT--CCC-------------------CGTCGGCC-- 147105
| |||||| |||||||| || | ||| ||||| ||
Sbjct 3761680 TCGCTGGTAGAGCTGGCAGTGTAGATGACCCTGGGGCTTGGTCTCAGGGTCGTCGTCCTT 3761621
Query 147106 ----------------ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149
||||| || ||| | |||||||| || || || ||||
Sbjct 3761620 TCGTCGGGGATAGGAGACGTAGAATTGGGCAAACATGTGGCAAGGTGGGAGGACCATCTT 3761561
Query 147150 GGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCT 147208
||| || |||||||||||||| || | | ||| || | | || | ||||| |
Sbjct 3761560 CTTCAGATCGGCGGGGTTCCAGGCGGAAAGGATCAGACGAC-GATCGTATGGGTTGGTGC 3761502
Query 147209 TAATCTCTTCGATAACC-CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCG 147267
| || | |||| | || | |||||||| || ||||||||| ||||| ||| |
Sbjct 3761501 GCAGCTTGTGAATAATCTCAGCA-AGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTG 3761443
Query 147268 CAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCG 147327
||| || ||| ||| |||||||||| |||||||||||||||||| || || || |||
Sbjct 3761442 GCGTCGACATACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTACACGGGGCCGAGATCG 3761383
Query 147328 CCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTT---GAGAAACTCGGGGGACCCGTGGGCG 147384
||| || | || | || ||| | || ||| |||||| |||| |||| | ||
Sbjct 3761382 CCGACCTCGCGATG-GTTGAGACCG--AGATTGTCGAGGAACTCGCGGGAGCCGTTGCCG 3761326
Query 147385 TCCCAGATGCCCACTCC--CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442
|||||||| | || | | || ||| ||| | ||| ||| |||| |||||
Sbjct 3761325 TCCCAGATCTTGATACCAGCCTCGCTGAG-GCT-GGTGGAGGATGTGTTGCCCTCGATGA 3761268
Query 147443 ACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
||||||| ||||| | | ||| | | ||||| | ||||||||| || |||||||
Sbjct 3761267 ACCAGAGGAGCTCGGCGATAACGGCGCGGGTGAAGACGCGCTTGGTGGTGAGGAGGGGGA 3761208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583485906736800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |