Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq124 201 2e-45 seq257 118 2e-20 >seq124 Length=1203342 Score = 201 bits (222), Expect = 2e-45 Identities = 363/515 (70%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||||||||| || ||||| ||||||||| |||| | Sbjct 1088810 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGATC 1088752 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| ||| |||||||| ||| Sbjct 1088751 TGTCCAAGGATCTCCACG----ACTGGAACAACCGCCTGACTTCCGACGAGCAGTTCTTC 1088696 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| ||| |||| ||||| || ||| ||| || |||||||| ||||||||| | Sbjct 1088695 ATCTCCCACATCCTTGCCTTCTT-CGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGT 1088637 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | ||||| || | || ||||| || | || ||||| |||||||| Sbjct 1088636 TGAGCGATTCAGCGGCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGCTTCCAGAT 1088577 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| || || || ||||||||| ||||||| Sbjct 1088576 CATGATGGAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGA 1088517 Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126 || || | || ||||||| |||||| || || | || | | | || | Sbjct 1088516 GCC-TTCTCAGCGAACATACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGA 1088458 Query 1456127 AGGCCGACTGGGCGATGAAGTGGA-TCA--ACAAGGAGGGCCTCGACACTTTGCCGAGCG 1456183 ||||||||||||| || |||| ||| ||||||| |||| | |||||| |||| Sbjct 1088457 AGGCCGACTGGGCTATCCGATGGATTCAGGACAAGGA----CTCGTC-CTTTGCTCAGCG 1088403 Query 1456184 GCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC--TCGGGCAGTTTCTGCGCCATC 1456240 ||||||| ||| || | ||||||||||||||| ||| | | || || | | ||||| Sbjct 1088402 TCTCGTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGC--CTCCATC 1088345 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||||||||||||| || |||||||| ||||| Sbjct 1088344 TTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCT 1088310 >seq257 Length=3268735 Score = 118 bits (130), Expect = 2e-20 Identities = 337/507 (66%), Gaps = 27/507 (5%) Strand=Plus/Plus Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741 |||||||||| || ||| | ||||| | | | ||| ||||| ||| ||||||| Sbjct 717292 CACAAGGAGGAGCTTGACTCCGCCATTGTCTATGACCGTGACTTCCAATACCAGTACTTT 717351 Query 259742 GGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAA-AGTGC--GCGATATTGTCGTCGA 259797 || | ||| |||| || | |||||||| ||| | || || | ||||| | | Sbjct 717352 GGCTTCAAGACTCTTGAGC-GATCCTACCTCCTCAAGATTGATGGCAAGATTGTTG---A 717407 Query 259798 GCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGA 259857 ||| ||||| | ||| ||||||||||| | ||||| | |||| | || Sbjct 717408 GCGTCCCCAACACATGATCATGCGTGTCTCTGTTGGCA--TCTGGGGT----------GA 717455 Query 259858 CAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCT 259916 ||| | |||| || |||| || ||| | ||||||| |||| ||| ||||| | Sbjct 717456 CAACA---TTGAGCGTGTCCTCGAGACTTACAACCTCATGTCG-AGCAAGTTCTTCAC-T 717510 Query 259917 CA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTT 259975 || || | ||||| || || ||||| || || || | || ||| || || ||||| Sbjct 717511 CATGCCTCCCCCACCCTGTTCAATGCGGGTACCCCCCAGCCCCAGCTCTCCTCATGCTTC 717570 Query 259976 CTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCG 260035 || | |||||||||| || || ||||| |||||||| || |||||| || || Sbjct 717571 CTTGTCGACATGAAGGAGGACAGTATTGAGGGTATCTATGATACTCTCAAGACCTGTGCC 717630 Query 260036 CTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGC 260095 | || |||||| ||| || || || || | || ||| | || ||| | ||| Sbjct 717631 ATGATTTCCAAGATGGCTGGTGGTATTGGCCTGAACGTGCACCGTATCCGTGCCACTGGC 717690 Query 260096 GCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTT 260155 | ||| | || || |||||||| |||||||| | ||||||||||| || || Sbjct 717691 TCTTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTC 717750 Query 260156 AACGACACGGCGCGCTACGTCGACCAG 260182 ||| |||| || || |||||||| ||| Sbjct 717751 AACAACACTGCCCGATACGTCGATCAG 717777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177783518322494