Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq57 131 2e-25 seq101 111 1e-19 >seq57 Length=3318891 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | |||||| || |||| |||||||||||||| || || Sbjct 1505387 CTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAA 1505328 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| ||||| ||||| | | Sbjct 1505327 GATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTCACATT 1505268 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| || || ||||||| ||||| || || || || | ||| || || Sbjct 1505267 GTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGAC 1505208 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1505207 AAAGATCTGCAT 1505196 Score = 113 bits (124), Expect = 4e-20 Identities = 129/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||||| | |||||| | || || |||||||| || ||||| Sbjct 1504931 CTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAA 1504872 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | ||| | || |||||||||| |||||| ||| | || Sbjct 1504871 GATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 1504813 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 || | | ||||||| || |||||||| | ||||| || || || |||| Sbjct 1504812 TGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCA 1504762 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || | || || |||||||| || ||||| Sbjct 1504655 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCAAA 1504596 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | ||| | || |||||||||| ||||| ||| | || Sbjct 1504595 GATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTT-AACGT 1504537 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 || | | || || || || ||||| | ||||| || || ||||||| Sbjct 1504536 TGTCGATGGTATCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCA 1504486 >seq101 Length=1115905 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || || |||||||| || ||||| Sbjct 940044 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 939985 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||||||| |||||| ||| | || Sbjct 939984 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 939926 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | |||||||| || || || | || || | Sbjct 939925 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGA 939866 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 939865 CGAAGATCTGCAT 939853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791982777960