Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq124 107 3e-18 >seq124 Length=1203342 Score = 107 bits (118), Expect = 3e-18 Identities = 365/561 (65%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| ||||| || || |||||||| | | || | ||||| || || || || Sbjct 1088252 GCAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 1088311 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| ||||||||||| |||||||| || |||| ||||| | ||| ||||| Sbjct 1088312 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAA 1088371 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA--ACTTGT-ATCATTATG 39792 |||||| || || || || || || || || | || | | || || | | || Sbjct 1088372 GATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTG 1088431 Query 39793 TATCCACTTCTG--TGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 ||||| || | ||||| || || ||||| | || || || || || || || Sbjct 1088432 AATCCA--TCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCG 1088489 Query 39851 TTAAAGAGATAATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909 || ||||| | ||||| | | | || || | || || || || | |||| || Sbjct 1088490 TTGAAGAGGT-ATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTA 1088548 Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969 | || || |||||||| || ||| ||||| || ||||| || |||| || |||| Sbjct 1088549 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGG 1088608 Query 39970 AATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGC 40029 || || ||||| | |||| || | | || || || || || || ||| || Sbjct 1088609 GATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGC 1088668 Query 40030 GGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATT 40086 || || || || | | || || || | | || |||| |||| || || Sbjct 1088669 AGCGAAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTT 1088728 Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146 |||||| | || ||| || || | ||| | || || || ||||| || || ||||| || Sbjct 1088729 CCAGTCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGC 1088788 Query 40147 CTTTTTGTACATGTTCCATAT 40167 ||| |||||||| | ||| || Sbjct 1088789 CTTCTTGTACATTTGCCAGAT 1088809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906335714680