Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq124 107 3e-18
>seq124
Length=1203342
Score = 107 bits (118), Expect = 3e-18
Identities = 365/561 (65%), Gaps = 12/561 (2%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||| ||||| || || |||||||| | | || | ||||| || || || ||
Sbjct 1088252 GCAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 1088311
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|||||||| ||||||||||| |||||||| || |||| ||||| | ||| |||||
Sbjct 1088312 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAA 1088371
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA--ACTTGT-ATCATTATG 39792
|||||| || || || || || || || || | || | | || || | | ||
Sbjct 1088372 GATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTG 1088431
Query 39793 TATCCACTTCTG--TGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850
||||| || | ||||| || || ||||| | || || || || || || ||
Sbjct 1088432 AATCCA--TCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCG 1088489
Query 39851 TTAAAGAGATAATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909
|| ||||| | ||||| | | | || || | || || || || | |||| ||
Sbjct 1088490 TTGAAGAGGT-ATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTA 1088548
Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969
| || || |||||||| || ||| ||||| || ||||| || |||| || ||||
Sbjct 1088549 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGG 1088608
Query 39970 AATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGC 40029
|| || ||||| | |||| || | | || || || || || || ||| ||
Sbjct 1088609 GATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGC 1088668
Query 40030 GGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATT 40086
|| || || || | | || || || | | || |||| |||| || ||
Sbjct 1088669 AGCGAAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTT 1088728
Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146
|||||| | || ||| || || | ||| | || || || ||||| || || ||||| ||
Sbjct 1088729 CCAGTCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGC 1088788
Query 40147 CTTTTTGTACATGTTCCATAT 40167
||| |||||||| | ||| ||
Sbjct 1088789 CTTCTTGTACATTTGCCAGAT 1088809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686906335714680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |