Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq257 111 5e-19
seq124 98.7 3e-15
>seq257
Length=3268735
Score = 111 bits (122), Expect = 5e-19
Identities = 220/320 (69%), Gaps = 12/320 (4%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | ||||| ||||||||| || || ||||||||||| || ||| ||| ||
Sbjct 717733 CCCATGCTTCGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGCAACAAGCGA 717792
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAACGGTT--TT 255095
|| || || || |||||||||| ||||| |||||||| || | |||| ||| ||
Sbjct 717793 CCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGA---GTTCCTT 717849
Query 255096 TACTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTG 255155
|| ||| | | || ||||| |||||| | ||| |||||| | | | |||
Sbjct 717850 GAC--CTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGCGACCTGTTCCTGGCTC 717907
Query 255156 TCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCATG 255214
||||| | |||||| || ||| || || || | || ||| ||||| |||||||
Sbjct 717908 TCTGGATCCCCGATCTCTTCATGAAGCGTGTTGAGAAGA-ACGGTGACTGGACCCTCATG 717966
Query 255215 TGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTAT 255274
|| |||||| | |||||||| | ||||| | ||||| ||||| || ||||||
Sbjct 717967 TGCCCCAACGAGTGCCCCGGTCTCGCCGACTGCTACGGTGAGGAGTTCGAGGCTCTGTAT 718026
Query 255275 CTGGAGTACGAGCGTGCCGG 255294
| |||| ||| |||||
Sbjct 718027 GAGAAGTATGAGAAGGCCGG 718046
>seq124
Length=1203342
Score = 98.7 bits (108), Expect = 3e-15
Identities = 119/161 (74%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766
|||| || ||||| || |||| ||||| || | || || || || |||| ||||||
Sbjct 1088406 AGCGTCTCGTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTT-GCCTCC 1088348
Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826
||||||||| | || |||||||| || |||| ||||||||||| ||||| || |||
Sbjct 1088347 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATC 1088288
Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| || |||||| | || |||||| ||||| || ||
Sbjct 1088287 TCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTCCT 1088247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588330159390715
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |