Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq57 141 3e-28
seq223 132 1e-25
seq101 96.9 1e-14
>seq57
Length=3318891
Score = 141 bits (156), Expect = 3e-28
Identities = 165/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| |||||||| || ||||| || ||||| || |
Sbjct 1504974 TTTGCATACCACCACGAAGGCGGAGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGT 1504915
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | | ||||| ||||| ||||| || |||||||||||||| || || |||||||
Sbjct 1504914 AGTCGGCGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGAT 1504855
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || || || || ||||| || || | || || || || |||| || || |
Sbjct 1504854 CAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAG 1504795
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || || || || | ||||| ||||| || || || ||
Sbjct 1504794 ACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGAC 1504752
Score = 141 bits (156), Expect = 3e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | |||||||| || ||||| || || || || || || || ||
Sbjct 1505198 CATACCACCACGCAGACGAAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTC 1505139
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| ||||| || || || ||||| || || || ||||| || || || ||||||||
Sbjct 1505138 GCTGAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGG 1505079
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| ||||| |||||||| || || | || || ||||| || | ||| || | |||
Sbjct 1505078 AGGAATACCTTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTC 1505019
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | |||||||| || ||||| || || || || |||||
Sbjct 1505018 CACCTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968
Score = 141 bits (156), Expect = 3e-28
Identities = 174/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563
|||| ||| ||||| | | || ||||| ||||| || ||||| || ||||| || ||
Sbjct 1505429 TTACTGACCGCCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTA 1505370
Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623
||||| || || || || ||||| || || || ||||| ||||| || || ||||| ||
Sbjct 1505369 GTCAGACAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTC 1505310
Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683
|| ||||| || || || |||||||| || | || ||||| ||||| | ||| | |||
Sbjct 1505309 GGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATGGTATC-GCTGG 1505251
Query 140684 T-TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || | ||||||||||| || || || ||||| ||||||||
Sbjct 1505250 ACTCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196
Score = 122 bits (134), Expect = 3e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | | || || || || || || ||||| || || || || |||||
Sbjct 1504694 CATGCCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATC 1504635
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| ||||| || |||||||||||||| || || |||||||||||
Sbjct 1504634 GGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGG 1504575
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || || |||||||| || | || || || || || | ||| || | ||
Sbjct 1504574 AGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACGTTGTCGATGGTATCCGAGGACTC 1504515
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
||| || || || | ||||| || ||
Sbjct 1504514 AACCTCGAGGGTGATGGTCTTGCCCGT 1504488
>seq223
Length=4967455
Score = 132 bits (146), Expect = 1e-25
Identities = 437/672 (65%), Gaps = 17/672 (3%)
Strand=Plus/Minus
Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321
|| || || || || || || |||||| |||| || || || | ||| | || |||||
Sbjct 2330510 GACATTATCGCCAACGACCAGGGTAACCGAACCACTCCCTCCTTCGTCGGTTTCACCGAC 2330451
Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381
|| |||||| |||| |||||| | || || || || | || || || | || ||
Sbjct 2330450 ACCGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACAACACT 2330391
Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACAAATCTACACAA 349435
|| || ||||| ||||| | || ||| | ||||| | |||| || ||
Sbjct 2330390 GTCTTCGATGCCAAGCGTTTGATCGGTCGCAAGTTCAGCGATGCTGAGG--TC----CAG 2330337
Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495
| || | || || || ||||| | | | || | ||| |||| || || || |||
Sbjct 2330336 GCCGACATGAAGCACTTCCCTTTCAA-GATCATCGACAAG--GGTGGCAAGCCTATCATT 2330280
Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGT 349554
|||||||| | || || || || || | || ||| || || || || || |||||
Sbjct 2330279 GAGGTTGAGTTCAAGGGCGAG-AAGAAGACCTTCACCCCTGAGGAGATCTCTTCCATGGT 2330221
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
| || ||| || | || || | || | ||||| || || | | |||||
Sbjct 2330220 CCTCACAAAGATGCGAGAGACCGCCGAGTCTTACCTTGGTGAGACCGTCAACAACGCTGT 2330161
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
|||| || || ||||| || || || | |||||| || || || ||||| ||
Sbjct 2330160 CGTTACCGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCCGGTCT 2330101
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
||||| || | || ||||| |||| || || || || ||||| || || || || ||
Sbjct 2330100 TATTGCTGGTCTCAACGTTCTCCGAATCATCAACGAGCCTACTGCCGCCGCCATCGCCTA 2330041
Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794
|| || || || | || || || || | || || || ||| | ||||||||
Sbjct 2330040 CGGTCTCGACAAGAAGATCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGG 2329981
Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854
||| || ||||| || || || || |||| ||||| || || || ||||| | |||||
Sbjct 2329980 TACCTTCGATGTTTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTTAAGTCGACTGC 2329921
Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
||||| || || | ||||| || ||||| || || ||||| || || || || ||
Sbjct 2329920 CGGTGACACTCACTTGGGTGGTGAGGATTTCGACAACCGTCTGGTCAACCACTTCGTCAA 2329861
Query 349915 AGAATTTAAGCG 349926
|| || |||||
Sbjct 2329860 TGAGTTCAAGCG 2329849
Score = 111 bits (122), Expect = 5e-19
Identities = 172/246 (70%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 378201 ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGC 378260
|||||| | || || | |||||||| ||| ||||| || | ||| || || ||
Sbjct 1923487 ATCTTCGAGGGCCTTGACCAGTCGTCGCTGAATGTAACCTGTCTCGGCAGTCTTGACCGC 1923428
Query 378261 AGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAG 378320
||||||||| | ||| | |||||| |||| || |||||||| || || | |||||||||
Sbjct 1923427 AGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTAAG 1923368
Query 378321 TCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGT 378380
|||| || | || |||| | || |||| || | ||||| | ||||| || ||
Sbjct 1923367 GCCACGAAGGTACGAGTTCTCGACGAAACCTCGGGCTTCGGGCGAGTAATCATCCTTGGT 1923308
Query 378381 ATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTG 378440
|||| || | ||| |||| || || || | ||||| || ||||| || || ||||
Sbjct 1923307 GAAATGGGGCAGTGTTCGATACTTGAATCCGAAGGGAATACGCTTTCCTTCGACGATCTG 1923248
Query 378441 TTGACC 378446
|||||
Sbjct 1923247 CTGACC 1923242
Score = 98.7 bits (108), Expect = 3e-15
Identities = 102/133 (77%), Gaps = 3/133 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| ||||||||| | ||||| ||| || || | |||||||| || ||||| || ||
Sbjct 1924248 CGGGGCACACCAAGGGTAACGTTC---TTGGAAGACACACCAGCGAAATGGAATGTGTTC 1924192
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||||||| ||||||||||| ||||| || || | ||| |||||||||||
Sbjct 1924191 AGTGTCATCTGAGTAGCAGGCTCACCAATGGACTGAGCAGCCAAAACACCAACCATTTCA 1924132
Query 377578 CCAGGATTGACAA 377590
||||| ||||||
Sbjct 1924131 CCAGGGCTGACAA 1924119
>seq101
Length=1115905
Score = 96.9 bits (106), Expect = 1e-14
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || || || || || ||||| || || || || || ||
Sbjct 940080 ACCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 940021
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || ||||| || || || || ||||||||||| || || ||||| || || ||
Sbjct 940020 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGG 939961
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
||| || || || ||||| || || | || || || || || | || || | || ||
Sbjct 939960 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 939901
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || || || || || ||||||||
Sbjct 939900 CTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515248828125461
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |