Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq57 141 3e-28 seq223 132 1e-25 seq101 96.9 1e-14 >seq57 Length=3318891 Score = 141 bits (156), Expect = 3e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| |||||||| || ||||| || ||||| || | Sbjct 1504974 TTTGCATACCACCACGAAGGCGGAGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGT 1504915 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | | ||||| ||||| ||||| || |||||||||||||| || || ||||||| Sbjct 1504914 AGTCGGCGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGAT 1504855 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || || ||||| || || | || || || || |||| || || | Sbjct 1504854 CAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAG 1504795 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || || | ||||| ||||| || || || || Sbjct 1504794 ACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGAC 1504752 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||| || ||||| || || || || || || || || Sbjct 1505198 CATACCACCACGCAGACGAAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTC 1505139 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | ||||| || || || ||||| || || || ||||| || || || |||||||| Sbjct 1505138 GCTGAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGG 1505079 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| |||||||| || || | || || ||||| || | ||| || | ||| Sbjct 1505078 AGGAATACCTTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTC 1505019 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | |||||||| || ||||| || || || || ||||| Sbjct 1505018 CACCTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 141 bits (156), Expect = 3e-28 Identities = 174/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 |||| ||| ||||| | | || ||||| ||||| || ||||| || ||||| || || Sbjct 1505429 TTACTGACCGCCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTA 1505370 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 ||||| || || || || ||||| || || || ||||| ||||| || || ||||| || Sbjct 1505369 GTCAGACAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTC 1505310 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 || ||||| || || || |||||||| || | || ||||| ||||| | ||| | ||| Sbjct 1505309 GGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCAATGGTATC-GCTGG 1505251 Query 140684 T-TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||||||||| || || || ||||| |||||||| Sbjct 1505250 ACTCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196 Score = 122 bits (134), Expect = 3e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || || || || || ||||| || || || || ||||| Sbjct 1504694 CATGCCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATC 1504635 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || |||||||||||||| || || ||||||||||| Sbjct 1504634 GGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGG 1504575 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || |||||||| || | || || || || || | ||| || | || Sbjct 1504574 AGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACGTTGTCGATGGTATCCGAGGACTC 1504515 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||| || || || | ||||| || || Sbjct 1504514 AACCTCGAGGGTGATGGTCTTGCCCGT 1504488 >seq223 Length=4967455 Score = 132 bits (146), Expect = 1e-25 Identities = 437/672 (65%), Gaps = 17/672 (3%) Strand=Plus/Minus Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || || || || || || |||||| |||| || || || | ||| | || ||||| Sbjct 2330510 GACATTATCGCCAACGACCAGGGTAACCGAACCACTCCCTCCTTCGTCGGTTTCACCGAC 2330451 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| |||| |||||| | || || || || | || || || | || || Sbjct 2330450 ACCGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACAACACT 2330391 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACAAATCTACACAA 349435 || || ||||| ||||| | || ||| | ||||| | |||| || || Sbjct 2330390 GTCTTCGATGCCAAGCGTTTGATCGGTCGCAAGTTCAGCGATGCTGAGG--TC----CAG 2330337 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 | || | || || || ||||| | | | || | ||| |||| || || || ||| Sbjct 2330336 GCCGACATGAAGCACTTCCCTTTCAA-GATCATCGACAAG--GGTGGCAAGCCTATCATT 2330280 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGT 349554 |||||||| | || || || || || | || ||| || || || || || ||||| Sbjct 2330279 GAGGTTGAGTTCAAGGGCGAG-AAGAAGACCTTCACCCCTGAGGAGATCTCTTCCATGGT 2330221 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || | || || | || | ||||| || || | | ||||| Sbjct 2330220 CCTCACAAAGATGCGAGAGACCGCCGAGTCTTACCTTGGTGAGACCGTCAACAACGCTGT 2330161 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 |||| || || ||||| || || || | |||||| || || || ||||| || Sbjct 2330160 CGTTACCGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCCGGTCT 2330101 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||||| || | || ||||| |||| || || || || ||||| || || || || || Sbjct 2330100 TATTGCTGGTCTCAACGTTCTCCGAATCATCAACGAGCCTACTGCCGCCGCCATCGCCTA 2330041 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | || || || || | || || || ||| | |||||||| Sbjct 2330040 CGGTCTCGACAAGAAGATCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGG 2329981 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || || || || |||| ||||| || || || ||||| | ||||| Sbjct 2329980 TACCTTCGATGTTTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTTAAGTCGACTGC 2329921 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||| || || | ||||| || ||||| || || ||||| || || || || || Sbjct 2329920 CGGTGACACTCACTTGGGTGGTGAGGATTTCGACAACCGTCTGGTCAACCACTTCGTCAA 2329861 Query 349915 AGAATTTAAGCG 349926 || || ||||| Sbjct 2329860 TGAGTTCAAGCG 2329849 Score = 111 bits (122), Expect = 5e-19 Identities = 172/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 378201 ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGC 378260 |||||| | || || | |||||||| ||| ||||| || | ||| || || || Sbjct 1923487 ATCTTCGAGGGCCTTGACCAGTCGTCGCTGAATGTAACCTGTCTCGGCAGTCTTGACCGC 1923428 Query 378261 AGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAG 378320 ||||||||| | ||| | |||||| |||| || |||||||| || || | ||||||||| Sbjct 1923427 AGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTAAG 1923368 Query 378321 TCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGT 378380 |||| || | || |||| | || |||| || | ||||| | ||||| || || Sbjct 1923367 GCCACGAAGGTACGAGTTCTCGACGAAACCTCGGGCTTCGGGCGAGTAATCATCCTTGGT 1923308 Query 378381 ATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTG 378440 |||| || | ||| |||| || || || | ||||| || ||||| || || |||| Sbjct 1923307 GAAATGGGGCAGTGTTCGATACTTGAATCCGAAGGGAATACGCTTTCCTTCGACGATCTG 1923248 Query 378441 TTGACC 378446 ||||| Sbjct 1923247 CTGACC 1923242 Score = 98.7 bits (108), Expect = 3e-15 Identities = 102/133 (77%), Gaps = 3/133 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || ||||||||| | ||||| ||| || || | |||||||| || ||||| || || Sbjct 1924248 CGGGGCACACCAAGGGTAACGTTC---TTGGAAGACACACCAGCGAAATGGAATGTGTTC 1924192 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||||| ||||||||||| ||||| || || | ||| ||||||||||| Sbjct 1924191 AGTGTCATCTGAGTAGCAGGCTCACCAATGGACTGAGCAGCCAAAACACCAACCATTTCA 1924132 Query 377578 CCAGGATTGACAA 377590 ||||| |||||| Sbjct 1924131 CCAGGGCTGACAA 1924119 >seq101 Length=1115905 Score = 96.9 bits (106), Expect = 1e-14 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || || || ||||| || || || || || || Sbjct 940080 ACCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 940021 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || || || || ||||||||||| || || ||||| || || || Sbjct 940020 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGG 939961 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| || || || ||||| || || | || || || || || | || || | || || Sbjct 939960 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 939901 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || || |||||||| Sbjct 939900 CTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 939853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515248828125461