Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq257 250 3e-61 seq277 138 1e-27 seq124 116 4e-21 >seq257 Length=3268735 Score = 250 bits (276), Expect = 3e-61 Identities = 515/756 (68%), Gaps = 20/756 (3%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| ||| | | || ||| |||||| || |||||||| ||||| ||| Sbjct 717425 TCATGCGTGTCTCTGTTGGCATCTGGGGTGACAACATTGAGCGTGTCCTCGAGACTTACA 717484 Query 53253 ACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309 || | ||| ||| |||| ||| || || ||| | || ||||||||||| || |||| Sbjct 717485 ACCTCATGTCGAGC---AAGTTCTTCACTCATGCCTCCCCCACCCTGTTCAATGCGGGTA 717541 Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369 | || || ||| | || |||||||| || | |||||||| ||| || || | Sbjct 717542 CCCCCCAGCCCCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAGGACAGTATTGAGG 717601 Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429 | ||||| || || |||||| |||||| || |||||| | | |||||||| || Sbjct 717602 GTATCTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCC 717661 Query 53430 TCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487 | || ||| | | | ||||||| | ||| | ||| || || ||||| | | Sbjct 717662 TGAACGTGCACCGTA--TCCGTGCCACTGGCTCTTACATCGCTGGTACCAACGGTACCTC 717719 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | | || || || ||||| || |||||||||||||| ||||| |||||| | ||||| Sbjct 717720 CAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGG 717779 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 ||| ||||| || | || ||||||||||| ||||| |||||||| || | | Sbjct 717780 TGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTT 717839 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667 ||||| || || ||||| ||| || || | || ||| | ||| || |||||||| Sbjct 717840 TGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGCGACCTGTT 717899 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727 ||||| ||||| || || ||||||||| | || |||||| ||| || ||| Sbjct 717900 CCTGGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGTTGAGAAGAACGGTGACTGGAC 717959 Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACG 53786 ||| |||||||| |||||||||||||| ||| | | || ||||||||||||||| | | Sbjct 717960 CCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTG-CTACGGTGAGGAGTTCGAGG 718018 Query 53787 AGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG----AAGAAGGTCAAGGCGCGT 53842 ||||| || ||| | || | ||||| || | |||| | ||||| | Sbjct 718019 CTCTGTATGAGAAGTATG-AG---AAGGCCGGTAAGGGTCGTAAGACCATGAAGGCCCAG 718074 Query 53843 GAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTAC 53902 || | ||| |||| ||||| || ||| ||||| || | || | |||| ||| Sbjct 718075 AAGCTCTGGTATGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTGTAC 718134 Query 53903 AAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||||| |||| |||||||||||||||||| Sbjct 718135 AAGGATCACTGCAACCGCAAGAGCAACCAGAAGAAC 718170 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || || || ||||| | ||| || |||||||||||||| || ||| |||| || | || Sbjct 719002 GCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCTCTCAATATCCACATGAAGGACCCC 719061 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| |||| | | | ||||||||| ||| |||||| || || |||||||| Sbjct 719062 ACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGGTCTGAAGACGGGC 719121 Query 55907 ATGTACTATCTGCGGAC 55923 |||||||| ||||| || Sbjct 719122 ATGTACTACCTGCGAAC 719138 >seq277 Length=3871947 Score = 138 bits (152), Expect = 1e-27 Identities = 211/299 (71%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 || ||||| || | ||||| | || ||||||||| || || || || || | |||| Sbjct 2364386 AGTCGAGTAAAGGTATAACGGGGACTAGCAGCATCCGAACCGCCGGCGAGTCGAGAACCG 2364445 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | |||||| || |||| | ||| | |||||| | ||||||||||| || || | | Sbjct 2364446 AAGTTTCCACTTGGTTCCAGGCAGTTGATGTTGTTCGATCCCACAAAGTTCTGGGCTAGG 2364505 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 || || || ||||| | |||||| ||||| || |||||||| || | ||| Sbjct 2364506 CCGATGATAGTCTGCTGGAGAGACTGCTCACCGTGGTGGTATGCCGTCTGTTCAGACACA 2364565 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 || || |||| | | |||||| |||| |||| |||||| |||||| ||| || | Sbjct 2364566 TAACCAGCCAATTCCACGACCTTCTTGTCCTTGAC--CAGGTTTCTCTTGAAGCAAGCGT 2364623 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTG 117595 | |||||||||||||||| ||||| | |||||| || ||| ||||| ||| || Sbjct 2364624 AGATCACCTTGCGCTGACCAGGCTTGAAGCCATCCAGGACCGAAGGAATCGATCGCATG 2364682 Score = 107 bits (118), Expect = 2e-18 Identities = 200/294 (68%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || || ||| | || |||| || || |||||| || || || || || | || || Sbjct 2364389 CGAGTAAAGGTATAACGGGGACTAGCAGCATCCGAACCGCCGGCGAGTCGAGAACCGAAG 2364448 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| || || ||| ||||| |||||| | ||||| || ||||| || | Sbjct 2364449 TTTCCACTTGGTTCCAGGCAGTTGATGTTGTTCGATCCCACAAAGTTCTGGGCTAGGCCG 2364508 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 | || || ||| ||| | ||||||||||| || |||||||| || | | || Sbjct 2364509 ATGATAGTCTGCTGGAGAGACTGCTCACCGTGGTGGTATGCCGTCTGTTCAGACACATAA 2364568 Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 || ||||| | | | |||||| ||||| | |||||| |||||| || ||||| ||| Sbjct 2364569 CCAGCCAATTCCACGACCTTCTTGTCCTTGACCAGGTTTCTCTTGAAGCAAGCGTAGATC 2364628 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTG 152319 ||||||||||| || || || || |||| || ||||||||| ||| || Sbjct 2364629 ACCTTGCGCTGACCAGGCTTGAAGCCATCCAGGACCGAAGGAATCGATCGCATG 2364682 >seq124 Length=1203342 Score = 116 bits (128), Expect = 4e-21 Identities = 537/827 (65%), Gaps = 40/827 (5%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || |||||||| ||||| ||||| ||||| ||||| || | | |||||||||||||| Sbjct 1087968 TAGTCACCGACACGCTTCTCAAAGAAGTTCGTCTTGCCACCAAGGGAGATGTTCTCCATG 1088027 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAA--TAGGCTTCTCCCCAAACTGTGCCATGAGGC 74580 ||||||| ||||| | || ||| | | | | | | || | | ||| ||| | Sbjct 1088028 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTGTCGT-TGCCGAGGGCGA-CCAGGAGAC 1088085 Query 74581 GATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGC 74640 | || || || || | ||||||||| |||| | || | |||||||| ||| | Sbjct 1088086 GGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCTGCGTTCATGCCGAGGAGGGCAC 1088145 Query 74641 ACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCC-CATTGGACAATCTTG 74699 | || || ||||| || | ||||| ||| | | || || || | || | Sbjct 1088146 AGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTG-ATGATGTCC 1088204 Query 74700 TGAATGTCTT---TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAA 74755 || ||| | | || || ||| || | |||||||||| ||| | || |||||| Sbjct 1088205 TGGATGACCTGCTTGCTAG--CACGGC-CCTTGAGGTGAGAGTGAAGGAGGCA-GGCAAA 1088260 Query 74756 CTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGC 74813 || | || || || ||||| | || | || || || || | || |||||| Sbjct 1088261 GTC--GGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGC 1088318 Query 74814 ATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCT 74873 || || ||||||||||| | ||| ||||||| |||| |||||||||||||||||| Sbjct 1088319 ATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGATGCCC 1088378 Query 74874 TCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCA 74929 ||||| || |||||||| || || || || || | | || ||| ||||| Sbjct 1088379 TCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTC-CTTGTCCTGAATCCA 1088437 Query 74930 AGTCTG--AGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGAA 74986 || | |||||| || || ||| | | ||| |||| || || || || | ||| Sbjct 1088438 --TCGGATAGCCCAGTCGGC-CTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAA 1088494 Query 74987 GAGGCTTGCCTTCTCTTCG--GGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044 |||| || ||| || | || ||||||| | ||||||| | || ||||| ||| Sbjct 1088495 GAGGTATG--TTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552 Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104 || || || || ||| | | |||| | ||||||| | || ||||| | ||| Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612 Query 75105 TGTACAT--CCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162 || || | || |||| ||| | | ||||| ||||||||||||| ||||| | Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCA--ACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAG 1088670 Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGT---GAGTTTGTCCC 75219 |||| || || || | ||| ||| |||| ||| ||| | | |||| || Sbjct 1088671 CGAAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCC 1088730 Query 75220 AATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266 | || | || ||| | || ||| ||||||||| | ||||||||| Sbjct 1088731 AGTCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAA 1088777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214036862600