Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq257 250 3e-61
seq277 138 1e-27
seq124 116 4e-21
>seq257
Length=3268735
Score = 250 bits (276), Expect = 3e-61
Identities = 515/756 (68%), Gaps = 20/756 (3%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| ||| | | || ||| |||||| || |||||||| ||||| |||
Sbjct 717425 TCATGCGTGTCTCTGTTGGCATCTGGGGTGACAACATTGAGCGTGTCCTCGAGACTTACA 717484
Query 53253 ACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
|| | ||| ||| |||| ||| || || ||| | || ||||||||||| || ||||
Sbjct 717485 ACCTCATGTCGAGC---AAGTTCTTCACTCATGCCTCCCCCACCCTGTTCAATGCGGGTA 717541
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
| || || ||| | || |||||||| || | |||||||| ||| || || |
Sbjct 717542 CCCCCCAGCCCCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAGGACAGTATTGAGG 717601
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429
| ||||| || || |||||| |||||| || |||||| | | |||||||| ||
Sbjct 717602 GTATCTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCC 717661
Query 53430 TCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487
| || ||| | | | ||||||| | ||| | ||| || || ||||| | |
Sbjct 717662 TGAACGTGCACCGTA--TCCGTGCCACTGGCTCTTACATCGCTGGTACCAACGGTACCTC 717719
Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547
| | || || || ||||| || |||||||||||||| ||||| |||||| | |||||
Sbjct 717720 CAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGG 717779
Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607
||| ||||| || | || ||||||||||| ||||| |||||||| || | |
Sbjct 717780 TGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTT 717839
Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667
||||| || || ||||| ||| || || | || ||| | ||| || ||||||||
Sbjct 717840 TGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGCGACCTGTT 717899
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727
||||| ||||| || || ||||||||| | || |||||| ||| || |||
Sbjct 717900 CCTGGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGTTGAGAAGAACGGTGACTGGAC 717959
Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACG 53786
||| |||||||| |||||||||||||| ||| | | || ||||||||||||||| | |
Sbjct 717960 CCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTG-CTACGGTGAGGAGTTCGAGG 718018
Query 53787 AGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG----AAGAAGGTCAAGGCGCGT 53842
||||| || ||| | || | ||||| || | |||| | ||||| |
Sbjct 718019 CTCTGTATGAGAAGTATG-AG---AAGGCCGGTAAGGGTCGTAAGACCATGAAGGCCCAG 718074
Query 53843 GAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTAC 53902
|| | ||| |||| ||||| || ||| ||||| || | || | |||| |||
Sbjct 718075 AAGCTCTGGTATGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTGTAC 718134
Query 53903 AAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||||| |||| ||||||||||||||||||
Sbjct 718135 AAGGATCACTGCAACCGCAAGAGCAACCAGAAGAAC 718170
Score = 86.0 bits (94), Expect = 7e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
|| || || ||||| | ||| || |||||||||||||| || ||| |||| || | ||
Sbjct 719002 GCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCTCTCAATATCCACATGAAGGACCCC 719061
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
| ||| |||| | | | ||||||||| ||| |||||| || || ||||||||
Sbjct 719062 ACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGGTCTGAAGACGGGC 719121
Query 55907 ATGTACTATCTGCGGAC 55923
|||||||| ||||| ||
Sbjct 719122 ATGTACTACCTGCGAAC 719138
>seq277
Length=3871947
Score = 138 bits (152), Expect = 1e-27
Identities = 211/299 (71%), Gaps = 4/299 (1%)
Strand=Plus/Plus
Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358
|| ||||| || | ||||| | || ||||||||| || || || || || | ||||
Sbjct 2364386 AGTCGAGTAAAGGTATAACGGGGACTAGCAGCATCCGAACCGCCGGCGAGTCGAGAACCG 2364445
Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418
|| | |||||| || |||| | ||| | |||||| | ||||||||||| || || | |
Sbjct 2364446 AAGTTTCCACTTGGTTCCAGGCAGTTGATGTTGTTCGATCCCACAAAGTTCTGGGCTAGG 2364505
Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478
|| || || ||||| | |||||| ||||| || |||||||| || | |||
Sbjct 2364506 CCGATGATAGTCTGCTGGAGAGACTGCTCACCGTGGTGGTATGCCGTCTGTTCAGACACA 2364565
Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536
|| || |||| | | |||||| |||| |||| |||||| |||||| ||| || |
Sbjct 2364566 TAACCAGCCAATTCCACGACCTTCTTGTCCTTGAC--CAGGTTTCTCTTGAAGCAAGCGT 2364623
Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTG 117595
| |||||||||||||||| ||||| | |||||| || ||| ||||| ||| ||
Sbjct 2364624 AGATCACCTTGCGCTGACCAGGCTTGAAGCCATCCAGGACCGAAGGAATCGATCGCATG 2364682
Score = 107 bits (118), Expect = 2e-18
Identities = 200/294 (68%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085
|| || ||| | || |||| || || |||||| || || || || || | || ||
Sbjct 2364389 CGAGTAAAGGTATAACGGGGACTAGCAGCATCCGAACCGCCGGCGAGTCGAGAACCGAAG 2364448
Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145
| |||| || || ||| ||||| |||||| | ||||| || ||||| || |
Sbjct 2364449 TTTCCACTTGGTTCCAGGCAGTTGATGTTGTTCGATCCCACAAAGTTCTGGGCTAGGCCG 2364508
Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205
| || || ||| ||| | ||||||||||| || |||||||| || | | ||
Sbjct 2364509 ATGATAGTCTGCTGGAGAGACTGCTCACCGTGGTGGTATGCCGTCTGTTCAGACACATAA 2364568
Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265
|| ||||| | | | |||||| ||||| | |||||| |||||| || ||||| |||
Sbjct 2364569 CCAGCCAATTCCACGACCTTCTTGTCCTTGACCAGGTTTCTCTTGAAGCAAGCGTAGATC 2364628
Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTG 152319
||||||||||| || || || || |||| || ||||||||| ||| ||
Sbjct 2364629 ACCTTGCGCTGACCAGGCTTGAAGCCATCCAGGACCGAAGGAATCGATCGCATG 2364682
>seq124
Length=1203342
Score = 116 bits (128), Expect = 4e-21
Identities = 537/827 (65%), Gaps = 40/827 (5%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| |||||||| ||||| ||||| ||||| ||||| || | | ||||||||||||||
Sbjct 1087968 TAGTCACCGACACGCTTCTCAAAGAAGTTCGTCTTGCCACCAAGGGAGATGTTCTCCATG 1088027
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAA--TAGGCTTCTCCCCAAACTGTGCCATGAGGC 74580
||||||| ||||| | || ||| | | | | | | || | | ||| ||| |
Sbjct 1088028 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTGTCGT-TGCCGAGGGCGA-CCAGGAGAC 1088085
Query 74581 GATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGC 74640
| || || || || | ||||||||| |||| | || | |||||||| ||| |
Sbjct 1088086 GGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCTGCGTTCATGCCGAGGAGGGCAC 1088145
Query 74641 ACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCC-CATTGGACAATCTTG 74699
| || || ||||| || | ||||| ||| | | || || || | || |
Sbjct 1088146 AGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTG-ATGATGTCC 1088204
Query 74700 TGAATGTCTT---TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAA 74755
|| ||| | | || || ||| || | |||||||||| ||| | || ||||||
Sbjct 1088205 TGGATGACCTGCTTGCTAG--CACGGC-CCTTGAGGTGAGAGTGAAGGAGGCA-GGCAAA 1088260
Query 74756 CTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGC 74813
|| | || || || ||||| | || | || || || || | || ||||||
Sbjct 1088261 GTC--GGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGC 1088318
Query 74814 ATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCT 74873
|| || ||||||||||| | ||| ||||||| |||| ||||||||||||||||||
Sbjct 1088319 ATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGATGCCC 1088378
Query 74874 TCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCA 74929
||||| || |||||||| || || || || || | | || ||| |||||
Sbjct 1088379 TCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTC-CTTGTCCTGAATCCA 1088437
Query 74930 AGTCTG--AGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGAA 74986
|| | |||||| || || ||| | | ||| |||| || || || || | |||
Sbjct 1088438 --TCGGATAGCCCAGTCGGC-CTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAA 1088494
Query 74987 GAGGCTTGCCTTCTCTTCG--GGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044
|||| || ||| || | || ||||||| | ||||||| | || ||||| |||
Sbjct 1088495 GAGGTATG--TTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552
Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104
|| || || || ||| | | |||| | ||||||| | || ||||| | |||
Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612
Query 75105 TGTACAT--CCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162
|| || | || |||| ||| | | ||||| ||||||||||||| ||||| |
Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCA--ACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAG 1088670
Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGT---GAGTTTGTCCC 75219
|||| || || || | ||| ||| |||| ||| ||| | | |||| ||
Sbjct 1088671 CGAAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCC 1088730
Query 75220 AATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266
| || | || ||| | || ||| ||||||||| | |||||||||
Sbjct 1088731 AGTCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAA 1088777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214036862600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |