Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq57 109 5e-19
>seq57
Length=3318891
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| ||||| ||| | || ||||| || || || | |
Sbjct 1505196 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1505255
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || ||||| ||||| || || || || ||||| ||
Sbjct 1505256 GATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 1505315
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| || || || |||||||| || ||| | || || ||||||
Sbjct 1505316 CAGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAAC 1505375
Query 27168 ATTCAAAAGGAGTCGACC 27185
||||| ||||||||||||
Sbjct 1505376 ATTCAGAAGGAGTCGACC 1505393
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059
|| || || |||||||||||| |||| || || || ||||| | |||||| |||| ||
Sbjct 1504752 GTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCGAC 1504811
Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119
| ||||| || || || ||||| || ||||| || || ||||| ||||| | ||
Sbjct 1504812 AACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATC 1504871
Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179
| || || || || | || || | ||| | |||| ||||||||||| ||||||
Sbjct 1504872 TTTGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCGCCGACTACAACATTCAGAAGGAG 1504931
Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||| | ||| | ||| | || | || ||||| ||
Sbjct 1504932 TCCACCCTTCATCTCGTTCTCCGCCTTCGTGGTGGTAT 1504969
Score = 98.7 bits (108), Expect = 9e-16
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || || ||| | || || ||||| |||||| |||||
Sbjct 1504968 ATGCAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCC 1505027
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || || || || || ||||| || || || ||||||
Sbjct 1505028 GATACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCAA 1505087
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC--CGATTACA 27165
||||| | || | ||||||||| ||| | || ||| | ||| | | || ||| ||||
Sbjct 1505088 CAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGAC-GGCCGAAC-TCTCAGCGACTACA 1505145
Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||| || ||||| || || | || | ||| | ||| |||| ||||| ||
Sbjct 1505146 ACATCCAGAAGGAATCAACTCTGCACCTTGTTCTTCGTCTGCGTGGTGGTAT 1505197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434916839730240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |