Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq57 109 5e-19 >seq57 Length=3318891 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| ||||| ||| | || ||||| || || || | | Sbjct 1505196 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1505255 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || ||||| ||||| || || || || ||||| || Sbjct 1505256 GATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 1505315 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || |||||||| || ||| | || || |||||| Sbjct 1505316 CAGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAAC 1505375 Query 27168 ATTCAAAAGGAGTCGACC 27185 ||||| |||||||||||| Sbjct 1505376 ATTCAGAAGGAGTCGACC 1505393 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || |||||||||||| |||| || || || ||||| | |||||| |||| || Sbjct 1504752 GTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCGAC 1504811 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || || ||||| || ||||| || || ||||| ||||| | || Sbjct 1504812 AACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATC 1504871 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | || || || || | || || | ||| | |||| ||||||||||| |||||| Sbjct 1504872 TTTGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCGCCGACTACAACATTCAGAAGGAG 1504931 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||| | ||| | ||| | || | || ||||| || Sbjct 1504932 TCCACCCTTCATCTCGTTCTCCGCCTTCGTGGTGGTAT 1504969 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || ||| | || || ||||| |||||| ||||| Sbjct 1504968 ATGCAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCC 1505027 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || || || || ||||| || || || |||||| Sbjct 1505028 GATACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCAA 1505087 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC--CGATTACA 27165 ||||| | || | ||||||||| ||| | || ||| | ||| | | || ||| |||| Sbjct 1505088 CAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGAC-GGCCGAAC-TCTCAGCGACTACA 1505145 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || ||||| || || | || | ||| | ||| |||| ||||| || Sbjct 1505146 ACATCCAGAAGGAATCAACTCTGCACCTTGTTCTTCGTCTGCGTGGTGGTAT 1505197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916839730240