Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq223 95.1 1e-14
>seq223
Length=4967455
Score = 95.1 bits (104), Expect = 1e-14
Identities = 124/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Plus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC--CCATCTC 34385
||||||||||||| |||| || || || || || ||||| | || || ||| ||
Sbjct 3761315 AAGATCTGGGACGGCAACGGCTCCCGCGAGTTCCTCGACAATCTCGGTCTCAACCA--TC 3761372
Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445
| |||| ||||| | ||||| || ||||| ||||||||| | |||||||| || ||||
Sbjct 3761373 GCGAGGTCGGCGATCTCGGCCCCGTGTACGGCTTCCAGTGGCGGCACTTTGGCGCCGAGT 3761432
Query 34446 ATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCT 34491
|| | | || ||| ||||||| |||| ||||||| ||||||||
Sbjct 3761433 AT-GTCGACGCCAAGACGGACTACACGGGCCAGGGAGTCGACCAGCT 3761478
Score = 95.1 bits (104), Expect = 1e-14
Identities = 124/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Minus
Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAA 6912
|||||||| ||||||| |||| ||||||| ||| || | | |||||| || |||||
Sbjct 3761478 AGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGAC-ATACTCGGCGCCAAA 3761420
Query 6913 GTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG--GAAC 6970
||| | ||||||||| ||||| || ||||| | ||||| |||| ||| ||| ||
Sbjct 3761419 GTGCCGCCACTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGA--TGGTTGAGA 3761362
Query 6971 CCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
|| | ||||| || || || || || |||| |||||||||||||
Sbjct 3761361 CCGAGATTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTT 3761315
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || ||||| | |||||||| | || || |||||||||||||||||
Sbjct 3761662 CTGCCAGCTCTACCAGCGATCCTGCGACATGGGTCTTGGTGTCCCGTTCAACATTGCTAG 3761721
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGG 34746
||||| || | || ||||||| || || ||| | ||||| |||||
Sbjct 3761722 CTACGCATTGTTGACACACATGATGGCGCACGTCTGCGAATTGGTACCTGG 3761772
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 6599 CCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATG 6658
||||| ||||| | ||| || || ||||||| || | || ||||| |||||||||
Sbjct 3761772 CCAGGTACCAATTCGCAGACGTGCGCCATCATGTGTGTCAACAATGCGTAGCTAGCAATG 3761713
Query 6659 TTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
|||||||| || || | |||||||| | ||||| || ||||||||||||
Sbjct 3761712 TTGAACGGGACACCAAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAG 3761662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448260791858640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |