Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq101 172 1e-37 seq57 167 5e-36 seq179 125 2e-23 seq277 93.3 1e-13 seq257 93.3 1e-13 >seq101 Length=1115905 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || ||||| | ||||| Sbjct 940064 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 940005 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || ||||| || |||| || ||||||||| Sbjct 940004 TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 939945 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||| || ||||||||| Sbjct 939944 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 939885 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| ||||| || || | |||||| || Sbjct 939884 TTCCCTGTGAGGGTCTTGACGAAGATCTGCATCTT 939850 >seq57 Length=3318891 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| ||||| || || || |||||||| || || || || | || || Sbjct 1505179 AGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 1505120 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| ||||||||||| || ||||| |||||||||| |||||||| ||| Sbjct 1505119 TCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCC 1505060 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||| || || ||| ||||| || ||||| ||| Sbjct 1505059 TGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTC 1505000 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || || | ||||| Sbjct 1504999 TTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| || ||||| || || ||||| || || | | ||| | || ||| Sbjct 1505407 AGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCT 1505348 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || ||||||||||| || || ||||| || |||| || ||||||||| Sbjct 1505347 TCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 1505288 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || || ||||| || | || ||||| |||||||| ||| Sbjct 1505287 TGAATCTTGGACTTCACATTGTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTC 1505228 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||||||||| ||||| | |||||| Sbjct 1505227 TTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196 Score = 163 bits (180), Expect = 7e-35 Identities = 149/188 (79%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| ||||| | |||||| | ||||| Sbjct 1504675 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 1504616 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| ||||| || || |||||||| | || ||||||||| Sbjct 1504615 TCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 1504556 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| |||||||| || ||| ||||||||||| ||||| ||| Sbjct 1504555 TGAATCTTCGACTTAACGTTGTCGATGGTATCCGAGGACTCAACCTCGAGGGTGATGGTC 1504496 Query 211083 TTTCCCGT 211090 || ||||| Sbjct 1504495 TTGCCCGT 1504488 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || || ||||| |||||||| || || ||||| || || || ||||| Sbjct 1504961 ACGAAGGCGGAGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGT 1504902 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || |||||||| || || ||||| ||||| || || |||||||| | || Sbjct 1504901 TCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCC 1504842 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct 1504841 CTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAG 1504782 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| ||||| || || || ||||| || Sbjct 1504781 GGTGATAGTCTTGCCGGTCAGGGTCTTGAC 1504752 >seq179 Length=1234945 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | || || | ||||| || ||||||||||| |||||||| Sbjct 140962 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 140903 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || || || || || | || ||||||||||||||||| || || || || Sbjct 140902 AGTCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 140843 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || |||||||| ||||| ||||| ||||| || ||||| || || Sbjct 140842 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 140784 >seq277 Length=3871947 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| ||||| || ||||| ||||||||||| || ||| |||||||| Sbjct 2871175 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGG 2871234 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| ||||| ||||| | ||||| Sbjct 2871235 GTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 2871275 >seq257 Length=3268735 Score = 93.3 bits (102), Expect = 1e-13 Identities = 182/266 (68%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||||||||| | |||| || ||| |||||| |||||||| | || Sbjct 718170 GTTCTTCTGGTTGCTCTTGCGGTTGCAG-TG--ATCCTTGTACAGCATGAAGGGGTTACC 718114 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||| | |||||| | || ||| || ||| |||| |||||| | ||||| Sbjct 718113 AGTCTCGGTCTGAGCCTCAAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTACG 718054 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | || || | ||||| ||||| | || || ||||||| ||| || ||| || Sbjct 718053 ACCCTTACCGGCCTTCTCATACTTCTCATACAGAGCCTCGAACTCCTCACCGTAGCAGTC 717994 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 |||||||||| ||| |||||||| | ||| |||| | ||||| | || || || Sbjct 717993 GGCGAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACG 717934 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGA 178355 ||||||||||| || | | |||||| Sbjct 717933 CTTCATGAAGAGATCGGGGATCCAGA 717908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159147737580755