Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq101 84.2 2e-11
seq57 84.2 2e-11
>seq101
Length=1115905
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || ||| ||| || || || || || ||| || || || | || ||
Sbjct 940061 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 940002
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| ||||| || || ||||||||||| | ||| | || ||| |||||| |
Sbjct 940001 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 939942
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| ||| | | | || ||| |||||||| || | ||||| | ||
Sbjct 939941 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 939883
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
|| || || || || || ||||| ||||||||
Sbjct 939882 CCCTGTGAGGGTCTTGACGAAGATCTGCATCTT 939850
>seq57
Length=3318891
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGG-CAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAA 39151
||| || || || || || || | |||| || || |||| || ||||| || || || |
Sbjct 1505387 CTCCTTCTGAATGTTGTAGTCAGACAAG-GTGCGACCGTCTTCCAGCTGCTTACCAGCGA 1505329
Query 39152 ATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCG 39211
| ||||| ||||||||||||| ||| | | ||| |||||| || || || |
Sbjct 1505328 AGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTCACAT 1505269
Query 39212 TCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271
| | | |||||||| ||||| || |||| ||||| | ||||| || || || || |
Sbjct 1505268 TGTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGA 1505209
Query 39272 CAAAGATTTGCAT 39284
||||||| |||||
Sbjct 1505208 CAAAGATCTGCAT 1505196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429544097530031
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |