Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq57 149 1e-30
seq101 136 9e-27
seq179 125 2e-23
>seq57
Length=3318891
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| |||||||| ||||| ||||| || |||| ||||| ||| | ||||| || ||
Sbjct 1505179 AGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 1505120
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||||||||| ||||| || || |||||||||||||| ||
Sbjct 1505119 TCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCC 1505060
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| |||||||| || || | |||||| || | ||||| |||
Sbjct 1505059 TGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTC 1505000
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | || || | ||| | ||||||
Sbjct 1504999 TTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| |||||||| || || || || || || | ||||| || | ||| || | || |||
Sbjct 1505407 AGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCT 1505348
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||||||||| || |||||||| |||||||| ||||||||
Sbjct 1505347 TCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 1505288
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||||||| || ||||| || || || || || | ||||| |||
Sbjct 1505287 TGAATCTTGGACTTCACATTGTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTC 1505228
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| || || | ||| ||
Sbjct 1505227 TTTCCGGTGAGAGTCTT 1505211
Score = 127 bits (140), Expect = 5e-24
Identities = 142/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| |||||||||| | || | |||||
Sbjct 1504675 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 1504616
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || || || || || || || ||||||||
Sbjct 1504615 TCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 1504556
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || |||||||| || |||| || || || | ||||| |||
Sbjct 1504555 TGAATCTTCGACTTAACGTTGTCGATGGTATCCGAGGACTCAACCTCGAGGGTGATGGTC 1504496
Query 225682 TTGCCCGTCA 225691
||||||||||
Sbjct 1504495 TTGCCCGTCA 1504486
>seq101
Length=1115905
Score = 136 bits (150), Expect = 9e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| ||||| ||| || || | |||||
Sbjct 940064 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 940005
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || ||||| || ||||| || ||||||||
Sbjct 940004 TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 939945
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || | ||||| || | |||||||||
Sbjct 939944 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 939885
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || || | || || | ||| | ||||| ||
Sbjct 939884 TTCCCTGTGAGGGTCTTGACGAAGATCTGCATCTT 939850
>seq179
Length=1234945
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||||| ||||| || |||||||| |||||||||||
Sbjct 140962 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 140903
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
||||| || || || || || || || |||||||| |||||||| ||| ||| ||
Sbjct 140902 AGTCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 140843
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| |||| || || || | ||||| ||||||||||||| || || | |||
Sbjct 140842 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 140784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192526814839178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |