Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq223 82.4 6e-11 >seq223 Length=4967455 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 ||||| || || || |||| ||| ||||| |||||||| || || || || || | || Sbjct 3761433 TACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCG 3761374 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT- 27617 | || | || || ||||| | || || | ||| |||||| ||||||||||||| Sbjct 3761373 CGATGGTTGAGACCGAGATTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTG 3761314 Query 27618 -TACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGC 27675 |||| | || | ||| ||| | |||| |||| ||||| || |||||| || ||| Sbjct 3761313 ATACCAGCCTCGCTGAG-GCTGGT-GGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGC 3761257 Query 27676 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 || | | ||||| ||||| | |||||| ||||||||||| Sbjct 3761256 TCGGCGATAACGGCGCGGGTGAAGACGCGCTTGGTGGTGAGGAGGGG 3761210 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165 |||||| | ||| || | ||| || || || || || | || || || || || ||| Sbjct 3761865 GGAAAGTCGCGGGGTTCACGCTCCAGTTGCGTGTTGAGGGCATCGACATGGTCAAGATAG 3761806 Query 27166 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCC-GGTTCTAGCCCGGTGACGTGAGC 27224 ||||| ||||| |||| | ||| | || || || ||| | | || |||||| || Sbjct 3761805 ACGTGCGCGTCGCCCATGACGTG-AGTAAGGCTGCCAGGTACCAATTCGCAGACGTGCGC 3761747 Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284 |||||||| || | | | |||||| || ||||| || || || || || |||||||| Sbjct 3761746 CATCATGTGTGTCAACAATGCGTAGCTAGCAATGTTGAACGGGACACCAAGACCCATGTC 3761687 Query 27285 CCCCGACCTCTGGTAGAGCTGACA 27308 | || | |||||||||||| || Sbjct 3761686 GCAGGATCGCTGGTAGAGCTGGCA 3761663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505907533097