Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq223 82.4 6e-11
>seq223
Length=4967455
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/227 (70%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558
||||| || || || |||| ||| ||||| |||||||| || || || || || | ||
Sbjct 3761433 TACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCG 3761374
Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT- 27617
| || | || || ||||| | || || | ||| |||||| |||||||||||||
Sbjct 3761373 CGATGGTTGAGACCGAGATTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTG 3761314
Query 27618 -TACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGC 27675
|||| | || | ||| ||| | |||| |||| ||||| || |||||| || |||
Sbjct 3761313 ATACCAGCCTCGCTGAG-GCTGGT-GGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGC 3761257
Query 27676 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
|| | | ||||| ||||| | |||||| |||||||||||
Sbjct 3761256 TCGGCGATAACGGCGCGGGTGAAGACGCGCTTGGTGGTGAGGAGGGG 3761210
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165
|||||| | ||| || | ||| || || || || || | || || || || || |||
Sbjct 3761865 GGAAAGTCGCGGGGTTCACGCTCCAGTTGCGTGTTGAGGGCATCGACATGGTCAAGATAG 3761806
Query 27166 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCC-GGTTCTAGCCCGGTGACGTGAGC 27224
||||| ||||| |||| | ||| | || || || ||| | | || |||||| ||
Sbjct 3761805 ACGTGCGCGTCGCCCATGACGTG-AGTAAGGCTGCCAGGTACCAATTCGCAGACGTGCGC 3761747
Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284
|||||||| || | | | |||||| || ||||| || || || || || ||||||||
Sbjct 3761746 CATCATGTGTGTCAACAATGCGTAGCTAGCAATGTTGAACGGGACACCAAGACCCATGTC 3761687
Query 27285 CCCCGACCTCTGGTAGAGCTGACA 27308
| || | |||||||||||| ||
Sbjct 3761686 GCAGGATCGCTGGTAGAGCTGGCA 3761663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369505907533097
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |