Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq57 141 7e-29 seq101 129 4e-25 seq179 109 4e-19 >seq57 Length=3318891 Score = 141 bits (156), Expect = 7e-29 Identities = 160/211 (76%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG--GCGAGTTGGCGCTCGTCGT 44186 || ||||| || || ||||| ||||||||||| ||| | ||||| | || |||| | Sbjct 1505176 ACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCG-GC-CGTCCT 1505119 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || ||||| ||||| ||||| | ||||| ||||| | ||| | ||||||||| ||| Sbjct 1505118 CGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCT 1505059 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||||| | | ||||| |||| ||||||||||| | || || |||| Sbjct 1505058 GGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCT 1504999 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||| ||||| |||||||||||||| Sbjct 1504998 TTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 122 bits (134), Expect = 6e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGT 44186 ||| |||||||| || |||||| || |||||||| || | | || || || |||| | Sbjct 1505405 CACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAAGGTG-CGACCGTCTT 1505347 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 |||||||||| || || ||||| | |||||||| || | || | ||| ||||| ||| Sbjct 1505346 CCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCT 1505287 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| | | ||||| ||| ||| || ||||||| || || |||| Sbjct 1505286 GAATCTTGGACTTCACATTGTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCT 1505227 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||| ||||| || ||||| ||||| Sbjct 1505226 TTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196 Score = 120 bits (132), Expect = 2e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| ||| |||||| || |||||||| |||||||| || | || || Sbjct 1504948 ACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCA 1504889 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| ||||||||||| | ||| | || ||||| ||| Sbjct 1504888 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGG 1504829 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||||| || |||||||| | || || ||||| Sbjct 1504828 ATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTG 1504769 Query 44309 CCCGTGAGGGTCTTCACGA 44327 || || |||||||| |||| Sbjct 1504768 CCGGTCAGGGTCTTGACGA 1504750 Score = 113 bits (124), Expect = 3e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| |||||||||||||||| || ||| | || || Sbjct 1504672 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCA 1504613 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| ||||||||||| | ||| | || ||||| ||| Sbjct 1504612 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGA 1504553 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| || ||| | ||||| || | ||| || ||||| | || || ||||| Sbjct 1504552 ATCTTCGACTT-AACGTTGTCGATGGTATCCGAGGACTCAACCTCGAGGGTGATGGTCTT 1504494 Query 44308 TCCCGT 44313 ||||| Sbjct 1504493 GCCCGT 1504488 >seq101 Length=1115905 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||| ||||||||||| ||| || ||| | || || Sbjct 940061 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 940002 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | |||||||| || | || | || ||||| ||| Sbjct 940001 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 939942 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || |||||||| | || |||||||| Sbjct 939941 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 939882 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 939881 CCTGTGAGGGTCTTGACGAAGATCTGCAT 939853 >seq179 Length=1234945 Score = 109 bits (120), Expect = 4e-19 Identities = 135/183 (74%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| || | || || |||||||| || || |||| Sbjct 140964 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 140905 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| ||||||||||| | || | || ||||| ||| ||||| ||| || ||| Sbjct 140904 TCAGTCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 140845 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| ||||||||||| Sbjct 140844 --CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 140787 Query 44326 GAA 44328 ||| Sbjct 140786 GAA 140784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989140821079