Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq57 167 6e-36
seq101 147 5e-30
seq179 140 8e-28
seq277 96.9 8e-15
seq257 86.0 2e-11
>seq57
Length=3318891
Score = 167 bits (184), Expect = 6e-36
Identities = 161/207 (78%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || ||||| ||||| || |||||||| ||||||||| || ||
Sbjct 1504971 CAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCCGAT 1505030
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| ||||| || ||||| || ||||| || || ||
Sbjct 1505031 ACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCAACAG 1505090
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||||||||| || || ||||| || || | ||||| ||| || ||| ||
Sbjct 1505091 CGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACAACATC 1505150
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || |||||||| ||||| ||||||
Sbjct 1505151 CAGAAGGAATCAACTCTGCACCTTGTT 1505177
Score = 140 bits (154), Expect = 8e-28
Identities = 151/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || || || || ||||||||||||||||| || ||||| ||||
Sbjct 1504750 TCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCG 1504809
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| |||||||| ||||| |||||||| || || |||||||| || ||||| || || |
Sbjct 1504810 ACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGA 1504869
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||| || ||||| ||||| || ||||| | || || ||||| || ||| | || || |
Sbjct 1504870 TCTTTGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCGCCGACTACAACATTCAGAAGG 1504929
Query 178111 AATCAACACTGCATCTTGTT 178130
| || || || ||||| |||
Sbjct 1504930 AGTCCACCCTTCATCTCGTT 1504949
Score = 136 bits (150), Expect = 1e-26
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||||||||| || ||| || |||||||| ||||| ||
Sbjct 1504488 ACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGATACCATCGACAACGTTAAGTCG 1504547
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| || || |||||||| || ||||| || || ||||| || |||||
Sbjct 1504548 AAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATCTTTGCTGGAAAG 1504607
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || ||||| | || ||| ||||||| ||| |||| || || || || || ||
Sbjct 1504608 CAGCTTGAGGATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAC 1504667
Query 178125 CTTGT 178129
|| ||
Sbjct 1504668 CTCGT 1504672
Score = 118 bits (130), Expect = 3e-21
Identities = 152/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || |||||||| ||||| || ||||| || ||||| || | ||
Sbjct 1505199 CAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGCGAT 1505258
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || |||||||||||||| || || || || || ||||||||
Sbjct 1505259 ACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAGCAG 1505318
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|||||||||||||| || || ||||| ||||| || | || |||| | || || ||| |
Sbjct 1505319 CGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCAC-CTTGTCTGACTACAACAT 1505377
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 1505378 TCAGAAGGAGTCGACCCTTCACCTTGT 1505404
>seq101
Length=1115905
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || |||||||| || ||||||||||| |||||||| || |||
Sbjct 939856 CAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 939915
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || || || |||||||||||
Sbjct 939916 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 939975
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || |||||||| ||||| | || || ||| || ||| ||
Sbjct 939976 CGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 940035
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 940036 CAGAAGGAGTCCACCCTCCACCTGGT 940061
>seq179
Length=1234945
Score = 140 bits (154), Expect = 8e-28
Identities = 139/180 (77%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||||||||| || || || || || || |||||||||||||| || ||| ||||||||
Sbjct 140783 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 140842
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
|| || ||||| ||||| |||||||| || || ||||| ||||| ||||| |||||
Sbjct 140843 TGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGACT 140902
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||| || || ||||| || ||||| | ||||| |||| || ||| |||| ||
Sbjct 140903 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAA 140962
>seq277
Length=3871947
Score = 96.9 bits (106), Expect = 8e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || ||||| ||||| || |||||||||||||||||| || |||
Sbjct 2871272 CAAATCTTTGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCTTCCGAC 2871213
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGA 178021
|||||||| |||||||| |||||||||||||| ||
Sbjct 2871212 ACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGA 2871175
>seq257
Length=3268735
Score = 86.0 bits (94), Expect = 2e-11
Identities = 179/264 (68%), Gaps = 2/264 (1%)
Strand=Plus/Minus
Query 214128 GTTTTTCTGGTTGCTTTTGCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCCCAC 214187
||| ||||||||||| |||||| | ||| ||||| ||||| || | ||
Sbjct 718170 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCAGT 718111
Query 214188 CTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTTGGC 214247
|||| ||||| |||| ||| || |||||| | |||||||||| | ||| | |
Sbjct 718110 CTCGGTCTGAGCCTCAAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTAC-GAC 718052
Query 214248 TCTTCCCT-CGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCAT 214306
||| || | || || ||||| ||||| |||| ||| || ||| ||||||| ||
Sbjct 718051 CCTTACCGGCCTTCTCATACTTCTCATACAGAGCCTCGAACTCCTCACCGTAGCAGTCGG 717992
Query 214307 CAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTT 214366
| |||||||| |||||||||||| | || |||| | || || | | || | |
Sbjct 717991 CGAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCT 717932
Query 214367 TCATGAAAAGGTCGGAAGTCCAGA 214390
||||||| || |||| ||||||
Sbjct 717931 TCATGAAGAGATCGGGGATCCAGA 717908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203726773654678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |