Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq57 167 6e-36 seq101 147 5e-30 seq179 140 8e-28 seq277 96.9 8e-15 seq257 86.0 2e-11 >seq57 Length=3318891 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| ||||| || |||||||| ||||||||| || || Sbjct 1504971 CAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCCGAT 1505030 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| ||||| || ||||| || ||||| || || || Sbjct 1505031 ACCATCGATAACGTGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCAACAG 1505090 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||||||||| || || ||||| || || | ||||| ||| || ||| || Sbjct 1505091 CGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACAACATC 1505150 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || |||||||| ||||| |||||| Sbjct 1505151 CAGAAGGAATCAACTCTGCACCTTGTT 1505177 Score = 140 bits (154), Expect = 8e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || ||||||||||||||||| || ||||| |||| Sbjct 1504750 TCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCG 1504809 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| ||||| |||||||| || || |||||||| || ||||| || || | Sbjct 1504810 ACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGA 1504869 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||| || ||||| ||||| || ||||| | || || ||||| || ||| | || || | Sbjct 1504870 TCTTTGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCGCCGACTACAACATTCAGAAGG 1504929 Query 178111 AATCAACACTGCATCTTGTT 178130 | || || || ||||| ||| Sbjct 1504930 AGTCCACCCTTCATCTCGTT 1504949 Score = 136 bits (150), Expect = 1e-26 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||||||||||| || ||| || |||||||| ||||| || Sbjct 1504488 ACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGATACCATCGACAACGTTAAGTCG 1504547 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || |||||||| || ||||| || || ||||| || ||||| Sbjct 1504548 AAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATCTTTGCTGGAAAG 1504607 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || ||||| | || ||| ||||||| ||| |||| || || || || || || Sbjct 1504608 CAGCTTGAGGATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAC 1504667 Query 178125 CTTGT 178129 || || Sbjct 1504668 CTCGT 1504672 Score = 118 bits (130), Expect = 3e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || |||||||| ||||| || ||||| || ||||| || | || Sbjct 1505199 CAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGCGAT 1505258 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||||||||| || || || || || |||||||| Sbjct 1505259 ACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAGCAG 1505318 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 |||||||||||||| || || ||||| ||||| || | || |||| | || || ||| | Sbjct 1505319 CGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCAC-CTTGTCTGACTACAACAT 1505377 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 1505378 TCAGAAGGAGTCGACCCTTCACCTTGT 1505404 >seq101 Length=1115905 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || |||||||| || ||||||||||| |||||||| || ||| Sbjct 939856 CAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 939915 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 939916 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 939975 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| | || || ||| || ||| || Sbjct 939976 CGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 940035 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 940036 CAGAAGGAGTCCACCCTCCACCTGGT 940061 >seq179 Length=1234945 Score = 140 bits (154), Expect = 8e-28 Identities = 139/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || || || || || || |||||||||||||| || ||| |||||||| Sbjct 140783 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 140842 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || || ||||| ||||| |||||||| || || ||||| ||||| ||||| ||||| Sbjct 140843 TGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGACT 140902 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| || || ||||| || ||||| | ||||| |||| || ||| |||| || Sbjct 140903 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAA 140962 >seq277 Length=3871947 Score = 96.9 bits (106), Expect = 8e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| ||||| || |||||||||||||||||| || ||| Sbjct 2871272 CAAATCTTTGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCTTCCGAC 2871213 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGA 178021 |||||||| |||||||| |||||||||||||| || Sbjct 2871212 ACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGA 2871175 >seq257 Length=3268735 Score = 86.0 bits (94), Expect = 2e-11 Identities = 179/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 214128 GTTTTTCTGGTTGCTTTTGCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCCCAC 214187 ||| ||||||||||| |||||| | ||| ||||| ||||| || | || Sbjct 718170 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCAGT 718111 Query 214188 CTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTTGGC 214247 |||| ||||| |||| ||| || |||||| | |||||||||| | ||| | | Sbjct 718110 CTCGGTCTGAGCCTCAAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTAC-GAC 718052 Query 214248 TCTTCCCT-CGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCAT 214306 ||| || | || || ||||| ||||| |||| ||| || ||| ||||||| || Sbjct 718051 CCTTACCGGCCTTCTCATACTTCTCATACAGAGCCTCGAACTCCTCACCGTAGCAGTCGG 717992 Query 214307 CAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTT 214366 | |||||||| |||||||||||| | || |||| | || || | | || | | Sbjct 717991 CGAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCT 717932 Query 214367 TCATGAAAAGGTCGGAAGTCCAGA 214390 ||||||| || |||| |||||| Sbjct 717931 TCATGAAGAGATCGGGGATCCAGA 717908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203726773654678