Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq101 149 6e-31 seq57 138 1e-27 seq179 111 1e-19 seq223 96.9 3e-15 >seq101 Length=1115905 Score = 149 bits (164), Expect = 6e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || ||| ||||||||| ||||| |||||| Sbjct 940079 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 940020 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| || || || |||||||| ||||||| |||| Sbjct 940019 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 939960 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | |||||| |||||||| Sbjct 939959 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCCAC 939901 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||| | || ||||| || || || || ||||| ||||| |||||||| || Sbjct 939900 CTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCATCTT 939850 >seq57 Length=3318891 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||| || || || || ||||||||||||||| ||||| || Sbjct 1505422 CCGCCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAC 1505363 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| |||| || |||||||| || ||||| || || ||||| ||||| | |||| Sbjct 1505362 AAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGA 1505303 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| | || | |||| || | | | || ||||| ||||| | Sbjct 1505302 ATACCCTCCTTGTCC-TGAATCTTGGACTTC-ACATTGTCAATGGTATCGCTGGACTCGA 1505245 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || || || ||||| || || |||||||| Sbjct 1505244 CCTCCAGAGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196 Score = 120 bits (132), Expect = 3e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || ||| ||||||||||||||| ||||||| | Sbjct 1504966 CCACCACGAAGGCGGAGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 1504907 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||| || || || ||||||||||| || || | || Sbjct 1504906 AGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGG 1504847 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | |||||| |||||||| Sbjct 1504846 ATGCCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATCGTGTCGGAAGACTCCAC 1504788 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || ||||| ||||| |||| Sbjct 1504787 CTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGA 1504750 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || ||||| || |||||||| ||||| |||||| | Sbjct 1505194 CCACCACGCAGACGAAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTG 1505135 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||| |||||||||||||| || || |||||||| || | ||| Sbjct 1505134 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGA 1505075 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| ||| ||| || |||| ||| | | || ||| ||| ||||| Sbjct 1505074 ATACCTTCCTTATCCTGGATCTTCGACTTC-ACGTTATCGATGGTATCGGACGATTCCAC 1505016 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| || ||||| Sbjct 1505015 CTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || ||| ||||||||| ||||| || ||||| Sbjct 1504691 GCCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 1504632 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || |||||||| || || || ||||||||||| || || | || Sbjct 1504631 AAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGG 1504572 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | | |||| | | | || || ||||| | Sbjct 1504571 GATGCCCTCCTTGTCC-TGAATCTTCGACTTAACGTTGTCGATGGTATCCGAGGACTCAA 1504513 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCA 41840 |||| | || || || || ||||||| Sbjct 1504512 CCTCGAGGGTGATGGTCTTGCCCGTCA 1504486 >seq179 Length=1234945 Score = 111 bits (122), Expect = 1e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||| || || | || || ||||||||||| ||||| | Sbjct 140964 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 140905 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| ||||| || |||| ||| | || |||||||||| ||| || ||| || | Sbjct 140904 TCAGTCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACATTG 140846 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||| ||||| | || || || || |||||||| ||||| ||| Sbjct 140845 TCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 140786 Query 41852 AAA 41854 ||| Sbjct 140785 AAA 140783 >seq223 Length=4967455 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 ||||| || ||||| || || |||||| ||||||| |||||| |||||| || ||| Sbjct 3867896 CGTATTGCTCCTCGATCTGGTCTCGCCTCCAAGCACTTCATCGACACGGGCGCTGGCGTC 3867837 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||||||||||||||| | || | |||| || | ||||||||||||||||| Sbjct 3867836 ATCGACGCCGACTACAGAGGCCAGGTCAAGGTCCTTCTCTTCAACCACGGCGA 3867784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302341484400