Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq145 129 5e-25 seq27 116 3e-21 seq80 104 2e-17 >seq145 Length=1022755 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || |||||||| ||||||| ||||| ||||||| Sbjct 404486 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 404427 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || |||||||| || || || |||||||||||||| Sbjct 404426 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 404367 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| ||||| | ||| | ||| || Sbjct 404366 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 404307 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || ||||||||||| Sbjct 404306 CCCGTGAGGGTCTTGACGAAAATCTGCAT 404278 >seq27 Length=3261259 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | || | || | ||||| || ||||| || || |||||||| |||||| Sbjct 1153224 CCACCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTC 1153283 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||| || | ||| || |||||| |||| |||||||||||||| || || Sbjct 1153284 AAGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGG 1153343 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || |||||||| || ||| || || || | |||| ||||| | ||| ||| Sbjct 1153344 ATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACC 1153403 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || || |||||||| || || ||||||||||| Sbjct 1153404 TCAAGAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAAATCTGCAT 1153450 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || |||||||| ||||| | |||||| ||||| ||||| || || Sbjct 1153992 GTGGACTCCTTCTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 1154051 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || | || ||||| ||||| || || ||||||||||| || || ||| Sbjct 1154052 GCGAAAATCAAGCGTTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTA 1154111 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||| || | ||| ||||||| ||| | || ||||||||||| || Sbjct 1154112 ACATTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 1154171 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 1154172 TTGACGAAGATCTGCATG 1154189 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| ||||| || || || |||||||| ||| | ||| || |||||| Sbjct 1153469 CACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTC 1153528 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || || ||||| ||||||| ||||| ||||| ||||| || ||||||||||| Sbjct 1153529 AAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGAGGAATACCCTCCTTGTC 1153585 >seq80 Length=892031 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | ||| || ||||||||| || || |||||| |||| Sbjct 765911 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 765970 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || ||||| || || || || |||||||||||||| || || || || | ||| Sbjct 765971 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 766030 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||||| | ||||||||||| ||| | || ||||| ||||| || || || ||| Sbjct 766031 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 766090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829411273404