Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq145 114 1e-20 seq27 109 4e-19 seq80 95.1 1e-14 >seq145 Length=1022755 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 404486 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 404427 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| ||||| || || | |||||||||||| Sbjct 404426 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 404367 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| |||||||| Sbjct 404366 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 404307 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 ||||| || ||||| || || || ||||| |||||| Sbjct 404306 CCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 404271 >seq27 Length=3261259 Score = 109 bits (120), Expect = 4e-19 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||||||||| || || || ||| |||| || | Sbjct 1153981 CAAGATGAAGAGTGGACTCCTTCTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTCAA 1154040 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| ||||| || || |||||||| || | ||||||||||||| | Sbjct 1154041 GCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGA 1154100 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || |||||| | | | | || | ||| ||||| | ||| || ||||||| Sbjct 1154101 TCTTCGACTTAACATTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTGATGGTCTTGC 1154160 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | ||||| ||||| || ||||| |||||| || Sbjct 1154161 CGGTCAGGGTCTTGACGAAGATCTGCATGATG 1154192 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| ||| |||| | || |||| || || || ||||| Sbjct 1153259 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTGCTTACCAGCGAA 1153318 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| || || || || | ||||||||| ||| ||| || ||| || Sbjct 1153319 GATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTATCCTGAATCTTGCTCTTCACGTT 1153378 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | | ||| ||||| | || || ||||| || |||||||||||||| Sbjct 1153379 GTCGATAGTGTCACTAGACTCAACCTCAAGAGTGATGGTCTTTCCAGTCAGAGTCTTCAC 1153438 Query 45325 AAAGATTTGCAT 45336 || || ||||| Sbjct 1153439 GAAAATCTGCAT 1153450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| || || |||| |||||||| ||||| || || Sbjct 1153716 TCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCCAGTTGCTTTCCAGCAAAA 1153775 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||||| ||||| ||||| | ||||||||||||| Sbjct 1153776 ATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 1153814 >seq80 Length=892031 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 ||||||| |||||||||||| || | ||| ||| ||| ||||| || || |||| Sbjct 765909 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCG---AGTTGCTTACCAGCGA 765965 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | |||| ||||||||||| || || | |||||||||||| || || ||| || Sbjct 765966 AGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACAT 766025 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | | ||||| ||| ||||| | ||| || |||||||||||||| ||||||| Sbjct 766026 TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCA 766085 Query 45324 CAAA 45327 | || Sbjct 766086 CGAA 766089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074299598927