Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq162 275 6e-69 seq179 149 6e-31 seq27 114 1e-20 seq145 104 2e-17 >seq162 Length=1634208 Score = 275 bits (304), Expect = 6e-69 Identities = 635/954 (67%), Gaps = 2/954 (0%) Strand=Plus/Plus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 |||||||| ||||| ||||| |||||||| || |||||| | |||||| || || Sbjct 857480 GAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAA 857539 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 |||||| | || || || | || | ||||| || || || ||||| | ||| Sbjct 857540 AGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCT 857599 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||| | || || ||| | Sbjct 857600 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGC 857659 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | | |||| || ||| ||| | | ||||||||||| ||||| || Sbjct 857660 TTCTGAGCCTTGAT-CGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGC 857718 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || || || | ||||| |||||||| ||||| || | | | || ||||| || | Sbjct 857719 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATAAGTGT 857778 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || |||||||| || ||||||||||||| || ||||| || || ||| Sbjct 857779 CCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGGCAAGGAA 857838 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || ||||| || |||||||| || ||| |||||| | ||| | || || || Sbjct 857839 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 857898 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || | ||||| ||||||||||| | |||||| || || |||| ||| ||||| || Sbjct 857899 GACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACC 857958 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||||| || || || ||||||||| | || | ||||| || |||| |||||| || Sbjct 857959 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGA 858018 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | || || | || || | ||| || | | ||| Sbjct 858019 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 858078 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || || || || ||||| || || || ||||| |||||||| ||||| Sbjct 858079 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 858138 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 || ||||| || || | | |||||||| || || |||| ||| | | || || | Sbjct 858139 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 858198 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 ||| ||| || || ||| || ||||| ||| | | ||||| || ||||| || Sbjct 858199 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGACATCAGGTTGTATGT 858258 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || | | | || || || || || ||||| | | || ||||| ||||||| Sbjct 858259 CTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACACGCATGATCATGTG 858318 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 || || | |||||| | |||| ||| |||| || ||||| || | || || || Sbjct 858319 CTGTGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTT 858378 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || ||||| || | || | || || || || | || ||||| || | ||| Sbjct 858379 GAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGTCCAA 858432 >seq179 Length=1646338 Score = 149 bits (164), Expect = 6e-31 Identities = 557/862 (65%), Gaps = 31/862 (4%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| || || || || ||||| | || || | ||||| Sbjct 1576377 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 1576318 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAATTTTA--TTAA 57685 ||||||||||| ||| ||| | || | || | | || ||| | || | | Sbjct 1576317 TCTAAGGATCTCCACGACTGGAACAACCGCCT-GACTGCCGATGAGCAGTTCTTCGTCTC 1576259 Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745 ||| | | || || ||||| || || ||||||||||| |||||||| | ||||| | Sbjct 1576258 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 1576199 Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 ||| || || || | | ||||| | || || ||||| || || | || Sbjct 1576198 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 1576139 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 || ||| | || || || | || || || |||||||| || || | ||||| || Sbjct 1576138 GGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGC 1576079 Query 57866 CGAGA-AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | || ||| || || |||||||| || || || || ||| ||| |||||||| | Sbjct 1576078 CCAGCGAACCTAC-CTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTG 1576020 Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTC---GCCGAGAGGCTAATCG 57981 | ||| | ||| |||||| || | | || | | | | ||| | | || | | Sbjct 1576019 ACTGGGCCATCCGATGGATCCAA---GATAAGGACTCTTCCTTTGCCCAACGCCTCGTTG 1575963 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 | ||||| ||||| || ||||| ||||| || ||| || | || || ||| | | Sbjct 1575962 CTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATTTTCTGGCTCA 1575903 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| || || || ||||| || ||||| || |||||| | || || || ||||||| Sbjct 1575902 AGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGG 1575843 Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGG 58161 |||| || ||||| ||||| ||||| | |||||||| |||| | || | Sbjct 1575842 GTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCAC-------CTAAAGGGCCGTGCC 1575790 Query 58162 ATC--GC-----ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | | || || || || ||||| || || ||| | || ||| | ||||| || Sbjct 1575789 AGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTC 1575730 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || || ||| | ||||| |||||| ||| | ||| |||||||| Sbjct 1575729 ACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 1575670 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||| || || || | || | ||| || | |||| ||| ||||| | | Sbjct 1575669 GAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTC--TACAAGGCCA 1575612 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || || || ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 1575611 CCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGA 1575552 Query 58393 aaaaaGTTAGCGAATATCAAAA 58414 | ||| ||| || ||||| Sbjct 1575551 AGCGTGTTGCCGACTACCAAAA 1575530 >seq27 Length=3261259 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || |||||| |||| ||||| | || Sbjct 1154189 CATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTC 1154130 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | || || || || ||||||||| || | || |||||||| Sbjct 1154129 CGATACCATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCA 1154070 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || | || ||||| ||||| ||| | || ||| ||| | |||||||| Sbjct 1154069 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTATAA 1154010 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || ||||||||||| || || Sbjct 1154009 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 1153977 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||||||||| || || || ||||| | || ||||| | Sbjct 1153450 ATGCAGATTTTCGTGAAGACTCTGACTGGAAAGACCATCACTCTTGAGGTTGAGTCTAGT 1153391 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || | || ||| ||||| || | || || || ||| Sbjct 1153390 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAG 1153331 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||||||||||| | || ||||||| || ||| Sbjct 1153330 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACAAC 1153271 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || || || || || ||||| || || || || |||| Sbjct 1153270 ATCCAGAAGGAGTCAACTCTCCACCTCGTTCTCCGACT 1153233 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || ||||| |||| || || ||||||| | ||| Sbjct 1153896 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCGTCCGATACCATCG 1153837 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| || | || || |||||||||||||| | Sbjct 1153836 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 1153777 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | || ||||| || || |||||||| || | ||| || ||||| || || | Sbjct 1153776 TTTTTGCTGGAAAGCAACTGGAAGACGGCCGAACCCTTGCCGACTACAACATCCAGAAGG 1153717 Query 31383 AATCGACTCTTCATCTGGTACT 31404 |||| || |||||||| || || Sbjct 1153716 AATCTACCCTTCATCTCGTCCT 1153695 >seq145 Length=1022755 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || ||||||||| | || || || | Sbjct 404275 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 404334 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || || ||| Sbjct 404335 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 404394 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || || |||||||| ||| | || || || ||||||| || Sbjct 404395 CAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 404454 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || ||||| || Sbjct 404455 AACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 404489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765358021040