Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq145 104 2e-17 seq27 82.4 8e-11 >seq145 Length=1022755 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||||||| |||| || |||||||| || ||| Sbjct 404474 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 404415 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| || ||||| || || || ||||| || ||||| ||| || || Sbjct 404414 GCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 404355 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| | ||||||||||| ||| | |||||| || || | || Sbjct 404354 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTC 404295 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 404294 TTGACGAAAATCTGCAT 404278 >seq27 Length=3261259 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || ||||| || |||||||||||||| | |||| ||| || ||||| Sbjct 1153986 TGAAGAGTGGACTCCTTCTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 1154045 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || | |||| |||||||| ||||| || || || || ||||| ||| || Sbjct 1154046 TTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTC 1154105 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | || |||| | ||| ||||| | ||| | |||||||||||| Sbjct 1154106 GACTTAACATTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTC 1154165 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | || || ||||| || ||||| Sbjct 1154166 AGGGTCTTGACGAAGATCTGCAT 1154188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062840450400