Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq162 378 2e-99 >seq162 Length=1634208 Score = 378 bits (418), Expect = 2e-99 Identities = 1122/1700 (66%), Gaps = 48/1700 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| || Sbjct 858378 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCACA 858320 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 858319 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 858266 Query 363517 ----GAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATG 363570 || ||||| || || | | | || || | |||||||| || | || || | Sbjct 858265 CTTGGAGACATACAACCTGATGTCAA-GCAAGT-TCTTCACGCATGCTTCCCCCACGCTC 858208 Query 363571 TACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGAC 363630 | |||||| || || | | | || || |||| |||||||| | | | ||||||||| Sbjct 858207 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 858148 Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690 || || ||||| |||| || || || |||| ||||| | || ||||||| || Sbjct 858147 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 858088 Query 363691 GGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCAC 363749 || || |||||| | | ||| | | ||||| || | | ||||| ||| || Sbjct 858087 GGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG-CTCATACATCGCCGGTAC 858029 Query 363750 AGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 || ||| ||||| || | ||||| ||||||||||| || |||| ||||| ||| Sbjct 858028 CAACGG-TACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 857970 Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868 | |||||||||||||| ||||| || || ||||| || || ||||||||| | Sbjct 857969 ATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 857910 Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928 | | ||| | || ||||| ||||| ||||| || ||| || || ||||| | |||| Sbjct 857909 ACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTG 857850 Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAG 363988 | ||||| || ||| ||| |||||| | |||| | |||||||||||| || || | Sbjct 857849 CCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA--AAA 857792 Query 363989 GTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGG 364046 | | | | ||| |||| | ||||| |||| || || || || |||| | || Sbjct 857791 GAACGGTGACTGGACACTTATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGG 857732 Query 364047 TGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAAT 364106 || || | | ||||| ||||||||||| || || ||| |||| ||| ||||| || Sbjct 857731 AGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGACGAT 857672 Query 364107 TCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTA 364166 || |||||||| |||| ||||| | || | |||| |||||| |||| || | Sbjct 857671 CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCATT 857612 Query 364167 TATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCA 364226 ||| | ||||||||| | |||||||||||| ||||| || |||| ||||| | || Sbjct 857611 CATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCA-TCC 857553 Query 364227 GCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTAT 364285 | || ||| || || || || ||||| || ||| || || |||||| ||||| | Sbjct 857552 GAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCCGTCT 857493 Query 364286 GTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGACC 364339 | |||||||| || | | || || | || | | | |||| || | ||| Sbjct 857492 GCAACCTTGCCTCTCTATCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGCTACGACT 857433 Query 364340 ACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACA 364399 | || | || | | || | | || || | |||| || ||||| | ||||| Sbjct 857432 TCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGATG 857373 Query 364400 AGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTGGT 364458 ||| | || || ||| | || | || ||| ||||| || || || |||||| Sbjct 857372 TGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTGGT 857314 Query 364459 CTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTCGC 364516 |||||||| ||||| || || || | ||| | ||||| ||| | || || || | Sbjct 857313 CTTGGTGTTCAGGGTCTTGCCGATGCTTTCCT--TGCTCTGCGCATGCCCTTCGAGTCCC 857256 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 | || ||||||| || |||||| |||| ||||| || || ||| || || |||||| Sbjct 857255 CCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATTTATCACGCTGCGCTGACTG 857196 Query 364577 -CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTT 364635 || |||| | |||| || |||| ||||| || | |||| ||||| Sbjct 857195 CCTCCGTG-CAGCTGGCTAAGGAAGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCCGCC 857137 Query 364636 TCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGG 364695 || |||| | ||||||| || | ||||| |||| ||| |||| || ||| ||||| Sbjct 857136 TCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACTGG 857077 Query 364696 GATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAGCG 364752 || || || || | || |||| || || | |||||| || ||| || || Sbjct 857076 GAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGCAACAGTCTACTCCTT---GCT 857020 Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812 || ||||| || || ||| | ||||| || || ||||||||||||||||| || | Sbjct 857019 CCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTAC 856960 Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872 || |||| | || |||||| ||||| | || || || | ||| || || | Sbjct 856959 ACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTGG 856900 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || ||||||| ||| |||| || |||||| || ||||||||| ||||| Sbjct 856899 CTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCATT 856840 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTAC 364992 || | ||||| || | ||||||||||| | || | ||| | ||| || | || Sbjct 856839 GCTGAGAATGGATCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTAT 856780 Query 364993 AAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCT 365052 || || || ||||| || || ||| || | | ||||| || ||||| ||||| Sbjct 856779 AAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGAGGTGCC 856720 Query 365053 TTTATCTGTCAGAGCCAGTC 365072 || || |||| |||||| Sbjct 856719 TTCATTGATCAGTCCCAGTC 856700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350477246234