Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09]
187 sequences; 43,110,459 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq179 111 3e-19
seq82 95.1 3e-14
>seq179
Length=1646338
Score = 111 bits (122), Expect = 3e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || | ||| |||| ||| | || ||| |||| ||
Sbjct 1575768 ATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCC 1575709
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
||| | |||||||||||||| |||||| |||||||| || ||||| || || || |
Sbjct 1575708 CTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTC 1575649
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| |||| ||||| | ||||| || ||||| ||| |||||||| | ||| |||||
Sbjct 1575648 CTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAA 1575589
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
||| || ||| || || || ||||||||||| ||||||||
Sbjct 1575588 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 1575545
>seq82
Length=639665
Score = 95.1 bits (104), Expect = 3e-14
Identities = 172/249 (69%), Gaps = 2/249 (1%)
Strand=Plus/Plus
Query 334107 TCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTC 334166
|||||| | | ||| | || ||| | ||| || ||||| || ||| | |||| ||
Sbjct 91627 TCAATGGTGGTCATCTCAGTATCAGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCTTG 91686
Query 334167 AAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGT 334225
| | || || |||| |||||| ||| ||| |||| || |||||||| |||||
Sbjct 91687 ACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATGGCGCGCATGAGAGT 91745
Query 334226 TGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAA 334285
|| || || | ||||| || || || ||||| || || | |||||||| ||| ||
Sbjct 91746 GGACTTTCCGGAACCGTTGGGACCGCAAAGACCATAACGCTGACCACGCTTGAGACGGAG 91805
Query 334286 CCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAG 334345
| || | ||| |||||||| || |||| || || ||||| ||| ||| | || ||
Sbjct 91806 ATGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAATGTACAGTTGCAAAG 91865
Query 334346 ATCCTCACC 334354
|||||||||
Sbjct 91866 ATCCTCACC 91874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102877357568450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |