Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq179 154 2e-32 >seq179 Length=1646338 Score = 154 bits (170), Expect = 2e-32 Identities = 534/819 (65%), Gaps = 27/819 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| ||| | | | ||| || ||||| Sbjct 1575535 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCAT 1575594 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | | || | | | |||| |||| ||| Sbjct 1575595 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 1575649 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| |||||||||||| ||| ||||||||||| |||| ||| Sbjct 1575650 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 1575709 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || || || || |||| ||| ||||| ||||| || | ||| Sbjct 1575710 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATA 1575769 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | ||||| | | | | || | | || | || | || ||| || |||| Sbjct 1575770 TCTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCA 1575826 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||||||||| |||||||| || || |||||| ||| || ||| Sbjct 1575827 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGC 1575886 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 |||||||| |||||||| | ||||||||| | || | ||| ||||||||| ||| Sbjct 1575887 ATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAGATACCC 1575946 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCA 126228 || || ||||| |||| ||| || | |||||||| | | | || | | | ||| Sbjct 1575947 TCAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGA-AGAGTCCTTATCTTGGATCCA 1576005 Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 126287 || ||||| | ||||| || ||| || || | ||||| || || || ||| Sbjct 1576006 TCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAG 1576065 Query 126288 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 126347 || ||| | | || || ||||| || | || ||||| || || || ||| Sbjct 1576066 GTAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGG 1576124 Query 126348 CGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 126406 ||| | | | ||| || | ||| | |||||||| | || || ||| ||||| Sbjct 1576125 AGTGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGG 1576183 Query 126407 ACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 126465 ||||| | | ||| | | || ||||| ||||| ||||| || |||| || Sbjct 1576184 ACCTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAA 1576242 Query 126466 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 126522 || || ||||| | | ||| ||| |||| | ||| || | |||||||| Sbjct 1576243 GAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTC 1576302 Query 126523 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 || |||||||| ||||| || | |||||| |||||||| Sbjct 1576303 GTGGAGATCCTTAGAGAGGTCAATCTCCTCAGCAGTCCA 1576341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352203685960