Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq27 113 5e-20 >seq27 Length=3261259 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || || || |||||||| ||||| | || ||||| |||| Sbjct 1153977 AGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTATAATCAGAGAGAGTGCGGCCGTCC 1154036 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||||||||| |||| | || ||||||||||| || || || || || || Sbjct 1154037 TCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATACCCTCCTTGTCC 1154096 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || || || | || | |||| Sbjct 1154097 TGGATCTTCGACTTAACATTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTGATGGTC 1154156 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || ||||| || ||||| Sbjct 1154157 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1154188 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| || || |||||||| || || | ||| || ||||| Sbjct 1153695 AGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCT 1153754 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || ||| |||| || ||||||||||| ||||| || || || || || Sbjct 1153755 TCCAGTTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 1153814 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || || || | ||| | |||| Sbjct 1153815 TGGATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCGACCTCGAGAGTGATGGTC 1153874 Query 64412 TTGCCGGTCAAAGTTTTTACGA 64433 ||||| || | || || |||| Sbjct 1153875 TTGCCAGTGAGGGTCTTGACGA 1153896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643632080280