Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq162 221 1e-52 >seq162 Length=1634208 Score = 221 bits (244), Expect = 1e-52 Identities = 1060/1670 (63%), Gaps = 40/1670 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 858396 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 858337 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || | || Sbjct 858336 ATTGTCGAGCGCCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGAT 858277 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAG--AGGTATAC---CATGG 93892 || | || ||| | | | || || || | |||| || | | | |||| Sbjct 858276 ATCGAGCGAGTCTTGGAGACATACA---ACCTGATGT-CAAGCAAGTTCTTCACGCATG- 858222 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | |||| || || ||||| || || ||||| ||| || |||| || || ||| || Sbjct 858221 CTTCCCCCACGCTCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGG 858162 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | | |||| |||| || ||||| | ||| | |||||| |||||| | | Sbjct 858161 TTGATATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGA 858102 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTC 94070 |||| || || || || || || | | ||| ||| |||| ||||| | || || Sbjct 858101 TCTCCAAGATGGCTGGTGGTATTGGTCTGAATGTGCAC--CGTATCCGTGCTACTGGCTC 858044 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| ||||||||| || || || ||||| |||| |||||||| || |||||||| Sbjct 858043 ATACATCGCCGGTACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAA 857984 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || || || || ||||||||||| | | | ||| |||| || |||| Sbjct 857983 CAACACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTA 857924 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 |||||||| |||||| | || || | ||| | || || || ||||||||||| || Sbjct 857923 CCTCGAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAA 857864 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | ||| | ||||| ||| || || ||| | || || ||||||||||| Sbjct 857863 GGAGGAGGTCCGTGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAA 857804 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || || || ||| | ||||| ||| | || ||||| || || || || || | Sbjct 857803 GCGTGTTGAAAAGAACGGTGACTGGACACTTATGTGCCCCAACGAGTGCCCTGGCCTCGC 857744 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 |||| | ||| | || || | |||| | ||||| | |||||||| Sbjct 857743 CGACTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGG 857684 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | ||| || | ||| |||||| ||| | || | || | ||| ||||| Sbjct 857683 TCGCAAGACGATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGAC 857624 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | || | ||| | | ||| || | |||| |||| ||||| || |||| Sbjct 857623 CGGAAACCCATTCATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCT 857564 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 ||| ||| ||||| ||||| ||||| || ||| ||||||| | | || ||||| Sbjct 857563 CGGTACCATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGA 857504 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670 | | || || || ||||| | ||| | ||| || | ||| | | | |||| Sbjct 857503 GGTCGCCGTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-CAA-----CTAC-- 857452 Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--G 94728 | |||| | ||| | || |||| || | | | ||| || | || Sbjct 857451 -GATGAGGCTTGCTACGACTTCAAGAAGCTGCACAAGGT--CAGTCAGGTTGTTATTCGC 857395 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 |||||||||| | | ||||| |||| |||||| |||| |||||| ||| ||| Sbjct 857394 AACCTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAAC 857335 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 || || || ||||| || | || || |||||| | || || || | | || Sbjct 857334 ATGCGCCACCGACCCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG 857275 Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 || |||||| ||| || ||| || | | ||| | | || || || | |||| Sbjct 857274 CGCATGCCCTTCGAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATT 857215 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 ||| ||| || ||| ||||| || |||| | ||| | || || || Sbjct 857214 TATCACGCTGCGCTGACTGCCTCCGTGCAGCTGGCTA---AGGAAGAGGGTCCCTACTCC 857158 Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028 | ||| || || ||| |||| ||| | ||||||||| | ||| || ||| Sbjct 857157 ACCTTCAAGGGTTCCCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAG 857098 Query 95029 CCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAA 95088 ||||| | || | |||||||| |||| || | || || | | |||||| | Sbjct 857097 CCCTCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGC 857038 Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| || || | || || ||||| || ||| || | ||||| || ||||||||| Sbjct 857037 AACAGTCTACTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAAC 856978 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| |||| ||||||||| | ||| | | || || ||||| || || ||| Sbjct 856977 GAGTGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTC 856918 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAA 95267 | || ||||| || || ||||| || || | ||||| ||||| || Sbjct 856917 CAGGTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGC 856859 Query 95268 GGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATAC 95323 | ||||||| | |||| | || || ||| | |||||||| || | || | Sbjct 856858 TATGAAGAACCGCATCATTGCT----GAGAATGGATCCATTCAGAACATTCCCAACATCC 856803 Query 95324 CGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | | || ||||||| || || ||||| || ||||||||| | |||||| Sbjct 856802 CTGCCGATGTCAAGGCTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGC 856753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722043584520