Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09]
187 sequences; 43,110,459 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq179 154 2e-32
>seq179
Length=1646338
Score = 154 bits (170), Expect = 2e-32
Identities = 532/818 (65%), Gaps = 25/818 (3%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| | || ||||||||||||||||| ||||| || | ||| ||| || |||||
Sbjct 1575535 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCAT 1575594
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
|| || || ||||| | | || | | | |||| |||| |||
Sbjct 1575595 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 1575649
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
|||||||| | |||| |||||||||||| ||| ||||||||||| |||| |||
Sbjct 1575650 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 1575709
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
||| || || || || || |||| ||| |||||| || || || | |||
Sbjct 1575710 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATA 1575769
Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522
| ||||| | | | | || | | || | || | || ||| || |||
Sbjct 1575770 TCTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CAG-GCA 1575826
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || ||| |||||||||||||| |||||||| || || |||||| |||||| |||
Sbjct 1575827 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGC 1575886
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|||||||| |||||||| | ||||||||| | || | ||| ||||||||| |||
Sbjct 1575887 ATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAGATACCC 1575946
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCAC 127702
|| || ||||| |||| || || | ||||||||| | ||| | | |||
Sbjct 1575947 TCAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGAAGAGTCCTTATCTTGGATCCAT 1576006
Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TTCAAAGAG 127761
|| ||||| | ||||| || ||| || || | ||||| || || || ||| |
Sbjct 1576007 CGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGG 1576066
Query 127762 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 127821
| ||| | | || || ||||| || | || ||||| || || || |||
Sbjct 1576067 TAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGA 1576125
Query 127822 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 127880
||| | | | ||| || | ||| | |||||||| | || || ||| ||||| |
Sbjct 1576126 GTGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGA 1576184
Query 127881 CCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 127939
|||| | | ||| | | || ||||| ||||| ||||| || |||| ||
Sbjct 1576185 CCTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAG 1576243
Query 127940 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 127996
|| || ||||| | | ||| ||| |||| | ||| || | |||||||||
Sbjct 1576244 AAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCG 1576303
Query 127997 TCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
| ||||||||| ||||| || | |||||| ||||||||
Sbjct 1576304 TGGAGATCCTTAGAGAGGTCAATCTCCTCAGCAGTCCA 1576341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505765926920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |