Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq179 154 2e-32 >seq179 Length=1646338 Score = 154 bits (170), Expect = 2e-32 Identities = 532/818 (65%), Gaps = 25/818 (3%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| | || ||||||||||||||||| ||||| || | ||| ||| || ||||| Sbjct 1575535 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCAT 1575594 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345 || || || ||||| | | || | | | |||| |||| ||| Sbjct 1575595 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 1575649 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 |||||||| | |||| |||||||||||| ||| ||||||||||| |||| ||| Sbjct 1575650 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 1575709 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 ||| || || || || || |||| ||| |||||| || || || | ||| Sbjct 1575710 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATA 1575769 Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522 | ||||| | | | | || | | || | || | || ||| || ||| Sbjct 1575770 TCTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CAG-GCA 1575826 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| |||||||||||||| |||||||| || || |||||| |||||| ||| Sbjct 1575827 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGC 1575886 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 |||||||| |||||||| | ||||||||| | || | ||| ||||||||| ||| Sbjct 1575887 ATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAGATACCC 1575946 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCAC 127702 || || ||||| |||| || || | ||||||||| | ||| | | ||| Sbjct 1575947 TCAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGAAGAGTCCTTATCTTGGATCCAT 1576006 Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TTCAAAGAG 127761 || ||||| | ||||| || ||| || || | ||||| || || || ||| | Sbjct 1576007 CGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGG 1576066 Query 127762 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 127821 | ||| | | || || ||||| || | || ||||| || || || ||| Sbjct 1576067 TAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGA 1576125 Query 127822 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 127880 ||| | | | ||| || | ||| | |||||||| | || || ||| ||||| | Sbjct 1576126 GTGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGA 1576184 Query 127881 CCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 127939 |||| | | ||| | | || ||||| ||||| ||||| || |||| || Sbjct 1576185 CCTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAG 1576243 Query 127940 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 127996 || || ||||| | | ||| ||| |||| | ||| || | ||||||||| Sbjct 1576244 AAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCG 1576303 Query 127997 TCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | ||||||||| ||||| || | |||||| |||||||| Sbjct 1576304 TGGAGATCCTTAGAGAGGTCAATCTCCTCAGCAGTCCA 1576341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505765926920