Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq179 163 5e-35 >seq179 Length=1646338 Score = 163 bits (180), Expect = 5e-35 Identities = 185/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 |||||||| |||||||| ||| || |||||||| |||||||||| |||||| || | | Sbjct 1575815 AGGAGGCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAG 1575874 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA 160036 | || || ||||||| |||||| |||||||| ||||||| || || ||||| || Sbjct 1575875 GTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTG 1575934 Query 160037 AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTG 160096 || ||||| ||||| ||||| || || || ||||| | | |||| || | || | Sbjct 1575935 AAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGAAGAGTCCTTA 1575994 Query 160097 TCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACG 160156 || ||| |||| | ||||||| |||||||||||| |||||| || ||| ||| | | Sbjct 1575995 TCTTGGATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATG 1576054 Query 160157 GCGTTAAA 160164 ||||| || Sbjct 1576055 GCGTTGAA 1576062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153341324720